RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GON4LQ3T8J9 2241 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 A0A1W2PQU0 124 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 A0A1W2PR77 199 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 MFSD11O43934 449 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 FOXD2O60548 495 aaPredicted RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 RNGTTO60942 597 aaKnown RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 TNNT1P13805 278 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 ADRB3P13945 408 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 GNSP15586 552 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 CYLC1P35663 651 aaPredicted RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 DPP6P42658 865 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 MARCKSL1P49006 195 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 ADCY2Q08462 1091 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 GRIK2Q13002 908 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 FGL2Q14314 439 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 PUM1Q14671 1186 aaKnown RBP eCLIP9.86□□□□□ -0.831e-6■□□□□ 9.4
YBX3-212ENST00000542002 LBRQ14739 615 aaKnown RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 LLGL1Q15334 1064 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 KIF19Q2TAC6 998 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 ZNF805Q5CZA5 627 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 PRAMEF14Q5SWL7 426 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 LRRC38Q5VT99 294 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 SEL1L3Q68CR1 1132 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 ZSWIM9Q86XI8 627 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 TPCN2Q8NHX9 752 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 RNF25Q96BH1 459 aaPredicted RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 LRIG1Q96JA1 1093 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 GDAP1L1Q96MZ0 367 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 ZNF670Q9BS34 389 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 DESI2Q9BSY9 194 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 GTPBP2Q9BX10 602 aaKnown RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 CPEB1Q9BZB8 566 aaKnown RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 TMEM9BQ9NQ34 198 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 LCMT1Q9UIC8 334 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 CDV3Q9UKY7 258 aaKnown RBP9.86□□□□□ -0.83
YBX3-212ENST00000542002 ITM2BQ9Y287 266 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 SNX11Q9Y5W9 270 aa9.86□□□□□ -0.83
YBX3-212ENST00000542002 SPAG17Q6Q759 2223 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 A0A0A6YYK5 440 aaPredicted RBP9.85□□□□□ -0.83
YBX3-212ENST00000542002 LRRD1A4D1F6 860 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 AREL1O15033 823 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 RAD51BO15315 384 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SLC31A1O15431 190 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 PJA2O43164 708 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 IGSF6O95976 241 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 PRKCGP05129 697 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 PRLRP16471 622 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 CR2P20023 1033 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SLC1A1P43005 524 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 CSNK1DP48730 415 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 AFF3P51826 1226 aaKnown RBP9.85□□□□□ -0.83
YBX3-212ENST00000542002 NEK3P51956 506 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 RACK1P63244 317 aaKnown RBP9.85□□□□□ -0.83
YBX3-212ENST00000542002 SEMG2Q02383 582 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 NSUN2Q08J23 767 aaKnown RBP eCLIP9.85□□□□□ -0.83
YBX3-212ENST00000542002 GALNT2Q10471 571 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 TAZQ16635 292 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 HLA-BQ31612 363 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 UAP1L1Q3KQV9 507 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 LCE2DQ5TA82 110 aaPredicted RBP9.85□□□□□ -0.83
YBX3-212ENST00000542002 FBXL19Q6PCT2 694 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 MFSD7Q6UXD7 560 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 NPNTQ6UXI9 565 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 KDM7AQ6ZMT4 941 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 B4GALNT4Q76KP1 1039 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SRLQ86TD4 932 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 TTC7BQ86TV6 843 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 TRIM69Q86WT6 500 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 HORMAD1Q86X24 394 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 MAP7D3Q8IWC1 876 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 RHOT1Q8IXI2 618 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 MINDY1Q8N5J2 469 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 PLD5Q8N7P1 536 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 KRT35Q92764 455 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SERAC1Q96JX3 654 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 PSKH2Q96QS6 385 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 RTKNQ9BST9 563 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 ANP32EQ9BTT0 268 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SUV39H2Q9H5I1 410 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SP110Q9HB58 689 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 PREBQ9HCU5 417 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 FZD3Q9NPG1 666 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 DTLQ9NZJ0 730 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SAE1Q9UBE0 346 aaPredicted RBP9.85□□□□□ -0.83
YBX3-212ENST00000542002 TRIM10Q9UDY6 481 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 SUSD2Q9UGT4 822 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 ANKRD6Q9Y2G4 727 aa9.85□□□□□ -0.83
YBX3-212ENST00000542002 IGLON5A6NGN9 336 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 H0Y8X5 98 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 TRAFD1O14545 582 aaPredicted RBP9.84□□□□□ -0.83
YBX3-212ENST00000542002 GIPC1O14908 333 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 VILLO15195 856 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 AP1G1O43747 822 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 PCDH8O95206 1070 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 PAK4O96013 591 aaPredicted RBP9.84□□□□□ -0.83
YBX3-212ENST00000542002 KRT10P13645 584 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 CD59P13987 128 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 GARSP41250 739 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms