RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 AVPR1AP37288 418 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 RPL14P50914 215 aaKnown RBP12.67□□□□□ -0.38
RNF4-222ENST00000541204 ARPP19P56211 112 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 LSAMPQ13449 338 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 CYLC2Q14093 348 aaPredicted RBP12.67□□□□□ -0.38
RNF4-222ENST00000541204 GRM3Q14832 879 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 CNGA3Q16281 694 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 BNC2Q6ZN30 1099 aaPredicted RBP12.67□□□□□ -0.38
RNF4-222ENST00000541204 RTN4RL1Q86UN2 441 aaPredicted RBP12.67□□□□□ -0.38
RNF4-222ENST00000541204 SPATA24Q86W54 205 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 CASP10Q92851 521 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 LRGUKQ96M69 825 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 SERPINI1Q99574 410 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 COPS7BQ9H9Q2 264 aaPredicted RBP12.67□□□□□ -0.38
RNF4-222ENST00000541204 NDFIP2Q9NV92 336 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 MPP6Q9NZW5 540 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 ZDHHC2Q9UIJ5 367 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 PRPF19Q9UMS4 504 aaKnown RBP12.67□□□□□ -0.38
RNF4-222ENST00000541204 RAP2CQ9Y3L5 183 aa12.67□□□□□ -0.38
RNF4-222ENST00000541204 STX16-NPEPL1H3BU86 382 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 GRID2O43424 1007 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 TIMM44O43615 452 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 SBK3P0C264 359 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 TFEBP19484 476 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 NMBRP28336 390 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 TM4SF4P48230 202 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 NAGLUP54802 743 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 MS4A2Q01362 244 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 LAMB3Q13751 1172 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 ZNF423Q2M1K9 1284 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 NXNQ6DKJ4 435 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 PM20D1Q6GTS8 502 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 TMEM151AQ8N4L1 468 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 KLHDC9Q8NEP7 349 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 RP9Q8TA86 221 aaKnown RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 CNDP1Q96KN2 507 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 DRC3Q9H069 523 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 NMUR1Q9HB89 426 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 MKI67P46013 3256 aaKnown RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 M0QZQ0 153 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 H2AFYO75367 372 aaKnown RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 PAGE1O75459 146 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 SOAT2O75908 522 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 MT-CYBP00156 380 aaPredicted RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 DPP6P42658 865 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 ACLYP53396 1101 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 RPL26P61254 145 aaKnown RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 CEACAM7Q14002 265 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 GK3PQ14409 553 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 LIPMQ5VYY2 423 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 GLB1LQ6UWU2 654 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 MARVELD2Q8N4S9 558 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 BHLHE22Q8NFJ8 381 aaPredicted RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 PIP4K2CQ8TBX8 421 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
RNF4-222ENST00000541204 SCYL1Q96KG9 808 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 PKMYT1Q99640 499 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 TLK1Q9UKI8 766 aa12.66□□□□□ -0.38
RNF4-222ENST00000541204 A0A1W2PQH9 124 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 DENRO43583 198 aaKnown RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 AP1G1O43747 822 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 CRTAMO95727 393 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 CKBP12277 381 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 PPARGP37231 505 aaPredicted RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 AIF1P55008 147 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 GALNT2Q10471 571 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 MBTPS1Q14703 1052 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 RARS2Q5T160 578 aaKnown RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 ZYG11AQ6WRX3 759 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 KCTD4Q8WVF5 259 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 FCRL2Q96LA5 508 aaPredicted RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 CNBD2Q96M20 576 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 MCMBPQ9BTE3 642 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 UNKQ9C0B0 810 aaKnown RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 SMIM31A0A1B0GVY4 71 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 CYP11A1P05108 521 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 TCN1P20061 433 aaPredicted RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 PDCD2Q16342 344 aaPredicted RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 ANO4Q32M45 955 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.65□□□□□ -0.38
RNF4-222ENST00000541204 CLLU1OSQ5K130 101 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 DCLRE1AQ6PJP8 1040 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 SCD5Q86SK9 330 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 TTC9BQ8N6N2 239 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 CNTD1Q8N815 330 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 HDAC11Q96DB2 347 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 ZNF419Q96HQ0 510 aaPredicted RBP12.65□□□□□ -0.38
RNF4-222ENST00000541204 SUSD3Q96L08 255 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 C1QTNF1Q9BXJ1 281 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 GBA3Q9H227 469 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 ATXN3LQ9H3M9 355 aa12.65□□□□□ -0.38
RNF4-222ENST00000541204 OSER1Q9NX31 292 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms