RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 HCAR2Q8TDS4 363 aa13.29□□□□□ -0.28
LTBR-208ENST00000541005 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
LTBR-208ENST00000541005 TUBGCP5Q96RT8 1024 aa13.29□□□□□ -0.28
LTBR-208ENST00000541005 LUC7LQ9NQ29 371 aaKnown RBP13.29□□□□□ -0.28
LTBR-208ENST00000541005 IMPACTQ9P2X3 320 aa13.29□□□□□ -0.28
LTBR-208ENST00000541005 COL5A1P20908 1838 aaPredicted RBP13.29□□□□□ -0.28
LTBR-208ENST00000541005 A0A1B0GVT2 93 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 A0A1W2PR77 199 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 DCDC2BA2VCK2 349 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 SOWAHDA6NJG2 315 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 TMEM110-MUSTN1A8MSY1 372 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 SPINT1O43278 529 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 MAFKO60675 156 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 PALMO75781 387 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 NDUFA10O95299 355 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 CER1O95813 267 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 PEX11BO96011 259 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 UGT2B4P06133 528 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 ZNF883P0CG24 379 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 GKP32189 559 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 HSPA9P38646 679 aaKnown RBP13.28□□□□□ -0.28
LTBR-208ENST00000541005 MAGEA1P43355 309 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 CSNK1EP49674 416 aaKnown RBP13.28□□□□□ -0.28
LTBR-208ENST00000541005 ATXN3P54252 364 aaPredicted RBP13.28□□□□□ -0.28
LTBR-208ENST00000541005 NSUN2Q08J23 767 aaKnown RBP eCLIP13.28□□□□□ -0.28
LTBR-208ENST00000541005 GALNT2Q10471 571 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 SLC14A1Q13336 389 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 PAFAH1B3Q15102 231 aaKnown RBP13.28□□□□□ -0.28
LTBR-208ENST00000541005 SPA17Q15506 151 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 ZNF284Q2VY69 593 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 TMEM259Q4ZIN3 620 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 ANKRD20A8PQ5CZ79 823 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 NCBP2-AS2Q69YL0 99 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 KIAA1161Q6NSJ0 714 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 FBXL19Q6PCT2 694 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 GDPD4Q6W3E5 623 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
LTBR-208ENST00000541005 HORMAD1Q86X24 394 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 ATPAF2Q8N5M1 289 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 TMEM145Q8NBT3 493 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 NETO2Q8NC67 525 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 KCTD6Q8NC69 237 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 PSKH2Q96QS6 385 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 GTPBP2Q9BX10 602 aaKnown RBP13.28□□□□□ -0.28
LTBR-208ENST00000541005 CALN1Q9BXU9 219 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 SEPT3Q9UH03 358 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 PCDHA13Q9Y5I0 950 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 FADS3Q9Y5Q0 445 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 EPN1Q9Y6I3 576 aaPredicted RBP13.28□□□□□ -0.28
LTBR-208ENST00000541005 LRP4O75096 1905 aa13.28□□□□□ -0.28
LTBR-208ENST00000541005 A0A1W2PQU0 124 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 C3orf70A6NLC5 250 aaPredicted RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 AREL1O15033 823 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 INSIG1O15503 277 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 TSPAN6O43657 245 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 MFSD11O43934 449 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 OPHN1O60890 802 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 RNGTTO60942 597 aaKnown RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 WNT1P04628 370 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 CSRP1P21291 193 aaKnown RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 KDELR1P24390 212 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 GJC1P36383 396 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 ABL2P42684 1182 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 CTSKP43235 329 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 RGRP47804 291 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 SUOXP51687 545 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 FOXK2Q01167 660 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 OVGP1Q12889 678 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 LBRQ14739 615 aaKnown RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 KIF19Q2TAC6 998 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 C11orf63Q6NUN7 778 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 PIP4P1Q86T03 277 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 IQCHQ86VS3 1027 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 TMEM139Q8IV31 216 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 PQLC3Q8N755 202 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 MFSD2AQ8NA29 543 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 TSEN2Q8NCE0 465 aaKnown RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 OR2I1PQ8NGU4 316 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 SPOCK2Q92563 424 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 RAPGEF5Q92565 580 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 FATE1Q969F0 183 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 SERAC1Q96JX3 654 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 EXOC2Q96KP1 924 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 CALR3Q96L12 384 aaKnown RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 ZNF641Q96N77 438 aaPredicted RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 KLHL32Q96NJ5 620 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 CINPQ9BW66 212 aaPredicted RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 KLHL11Q9NVR0 708 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 ZFR2Q9UPR6 939 aaKnown RBP13.27□□□□□ -0.29
LTBR-208ENST00000541005 ANKRD6Q9Y2G4 727 aa13.27□□□□□ -0.29
LTBR-208ENST00000541005 BTNL10A8MVZ5 291 aa13.26□□□□□ -0.29
LTBR-208ENST00000541005 PRAMEF26H0Y7S4 382 aa13.26□□□□□ -0.29
LTBR-208ENST00000541005 WNT9AO14904 365 aa13.26□□□□□ -0.29
LTBR-208ENST00000541005 PSTPIP1O43586 416 aa13.26□□□□□ -0.29
LTBR-208ENST00000541005 BUB1BO60566 1050 aaPredicted RBP13.26□□□□□ -0.29
LTBR-208ENST00000541005 IPO7O95373 1038 aaKnown RBP13.26□□□□□ -0.29
LTBR-208ENST00000541005 TPRP12270 2363 aaKnown RBP13.26□□□□□ -0.29
LTBR-208ENST00000541005 COMTP21964 271 aa13.26□□□□□ -0.29
LTBR-208ENST00000541005 CD38P28907 300 aa13.26□□□□□ -0.29
LTBR-208ENST00000541005 GARSP41250 739 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms