RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 TWF2Q6IBS0 349 aaKnown RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 RWDD4Q6NW29 188 aaKnown RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 SPATA24Q86W54 205 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 PELI3Q8N2H9 469 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 TMEM86AQ8N2M4 240 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 CATSPER1Q8NEC5 780 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 PPHLN1Q8NEY8 458 aaKnown RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 ADCY4Q8NFM4 1077 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 HEXDCQ8WVB3 486 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 DLG3Q92796 817 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 CNBD2Q96M20 576 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 FCRL5Q96RD9 977 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 MRPL46Q9H2W6 279 aaKnown RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 POMKQ9H5K3 350 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 GLOD4Q9HC38 313 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 GTSE1Q9NYZ3 720 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 TCAF1Q9Y4C2 921 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 MYOCOSA0A1B0GUC4 107 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 NEMP2A6NFY4 417 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 KCNU1A8MYU2 1149 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 CAPNS1P04632 268 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 TFAP2AP05549 437 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 TCN1P20061 433 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 AFF1P51825 1210 aaKnown RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 CRYBB1P53674 252 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 C6orf52Q5T4I8 152 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 METTL25Q8N6Q8 603 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 TMEM102Q8N9M5 508 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 HMGCLL1Q8TB92 370 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 RNF34Q969K3 372 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 CLIC5Q9NZA1 410 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 MRPL42Q9Y6G3 142 aaKnown RBP13.43□□□□□ -0.26
PRICKLE3-205ENST00000540849 BTBD19C9JJ37 291 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 TRIM38O00635 465 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 AURKAO14965 403 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 RNASEH2AO75792 299 aaKnown RBP13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 HNRNPLP14866 589 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 CCNCP24863 283 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 CHRNA4P43681 627 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 PSEN2P49810 448 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 SULT2A1Q06520 285 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 PTK2BQ14289 1009 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 LDLRAD1Q5T700 205 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 TRIM67Q6ZTA4 783 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 ATPAF2Q8N5M1 289 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 C2CD4AQ8NCU7 369 aaPredicted RBP13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 DQX1Q8TE96 717 aaKnown RBP13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 MYLPFQ96A32 169 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 SMARCD1Q96GM5 515 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 NDNQ99608 321 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 TNFRSF12AQ9NP84 129 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 IGSF5Q9NSI5 407 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 NDUFA13Q9P0J0 144 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 APPL1Q9UKG1 709 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 FIS1Q9Y3D6 152 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 PCDHGA7Q9Y5G6 932 aa13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 NYNRINQ9P2P1 1898 aaKnown RBP13.42□□□□□ -0.26
PRICKLE3-205ENST00000540849 A0A087X1B8 175 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 TRPC5OSA6NMA1 111 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 ANXA9O76027 345 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 HLA-DQB2P05538 268 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 HSPA1AP0DMV8 641 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 HSPA1BP0DMV9 641 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 ATP5F1P24539 256 aaPredicted RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 ADRA1AP35348 466 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 CD151P48509 253 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 CLCNKBP51801 687 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 DNAJB13P59910 316 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 RBM20Q5T481 1227 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 ARMC3Q5W041 872 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 FAM219BQ5XKK7 198 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 ZNF470Q6ECI4 717 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 RBM44Q6ZP01 1051 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 AHI1Q8N157 1196 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 GALNT4Q8N4A0 578 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 PCDH20Q8N6Y1 951 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 IL12RB2Q99665 862 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 MRPL57Q9BQC6 102 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 SIK2Q9H0K1 926 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 TREX1Q9NSU2 369 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 SLC38A7Q9NVC3 462 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 NCKIPSDQ9NZQ3 722 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 CDH9Q9ULB4 789 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 BPTFQ12830 3046 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 VILLO15195 856 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 CLPTM1O96005 669 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 KCNA5P22460 613 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 RPL5P46777 297 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 KPNA2P52292 529 aaKnown RBP13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 PSME3P61289 254 aa13.41□□□□□ -0.26
PRICKLE3-205ENST00000540849 SLC5A9Q2M3M2 681 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms