RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 MPP1Q00013 466 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 SLC12A1Q13621 1099 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 CNGA3Q16281 694 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 ZYG11AQ6WRX3 759 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 KIAA0408Q6ZU52 694 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 ZNF296Q8WUU4 475 aaPredicted RBP13.93□□□□□ -0.18
RTN3-210ENST00000540798 OVCA2Q8WZ82 227 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 GPR78Q96P69 363 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 KLHL5Q96PQ7 755 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 CDK5RAP1Q96SZ6 601 aaKnown RBP13.93□□□□□ -0.18
RTN3-210ENST00000540798 EBF2Q9HAK2 575 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 SP110Q9HB58 689 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 PAK6Q9NQU5 681 aaPredicted RBP13.93□□□□□ -0.18
RTN3-210ENST00000540798 TAS2R1Q9NYW7 299 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 MROH6A6NGR9 719 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 TLR5O60602 858 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 RAMP2O60895 175 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 AOC1P19801 751 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 TACR2P21452 398 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 PBX3P40426 434 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 CD86P42081 329 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 SERPINH1P50454 418 aaKnown RBP13.93□□□□□ -0.18
RTN3-210ENST00000540798 ALG1LQ6GMV1 187 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
RTN3-210ENST00000540798 FBXO22Q8NEZ5 403 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 PPP4R1Q8TF05 950 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 STYXQ8WUJ0 223 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 VN1R3Q9BXE9 311 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 MMADHCQ9H3L0 296 aaPredicted RBP13.93□□□□□ -0.18
RTN3-210ENST00000540798 PNPOQ9NVS9 261 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 BACE2Q9Y5Z0 518 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 CDY1Q9Y6F8 540 aa13.93□□□□□ -0.18
RTN3-210ENST00000540798 ADAM12O43184 909 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 ATXN1LP0C7T5 689 aaKnown RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 ESRRAP11474 423 aaPredicted RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 GM2AP17900 193 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 IDH3AP50213 366 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 PRKAA2P54646 552 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 DSC2Q02487 901 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 CTBP1Q13363 440 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 BTG3Q14201 252 aaPredicted RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 USP10Q14694 798 aaKnown RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 POLD3Q15054 466 aaPredicted RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 TSTD2Q5T7W7 516 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 SLC41A1Q8IVJ1 513 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 RPRD1AQ96P16 312 aaPredicted RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 ATXN3LQ9H3M9 355 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 LTBP2Q14767 1821 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 TRIM13O60858 407 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 PEX11AO75192 247 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 MYL4P12829 197 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 RAB10P61026 200 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 KLHDC10Q6PID8 442 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 CIR1Q86X95 450 aaPredicted RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 CEP97Q8IW35 865 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 OR13J1Q8NGT2 312 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 GIPC2Q8TF65 315 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 ZNF599Q96NL3 588 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 ACE2Q9BYF1 805 aaPredicted RBP13.92□□□□□ -0.18
RTN3-210ENST00000540798 UNC93B1Q9H1C4 597 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 TLK1Q9UKI8 766 aa13.92□□□□□ -0.18
RTN3-210ENST00000540798 FAM95CA0A1B0GW59 222 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 HMBSP08397 361 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 CRABP2P29373 138 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 MAXP61244 160 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 LBRQ14739 615 aaKnown RBP13.91□□□□□ -0.18
RTN3-210ENST00000540798 PCSK7Q16549 785 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 STON2Q8WXE9 905 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
RTN3-210ENST00000540798 TAGLN3Q9UI15 199 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 ACVRL1P37023 503 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 LEPRP48357 1165 aaKnown RBP13.91□□□□□ -0.18
RTN3-210ENST00000540798 CD151P48509 253 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 ANKRD33Q7Z3H0 272 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 ENDOVQ8N8Q3 282 aaKnown RBP13.91□□□□□ -0.18
RTN3-210ENST00000540798 CDH19Q9H159 772 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 DENND2DQ9H6A0 471 aaPredicted RBP13.91□□□□□ -0.18
RTN3-210ENST00000540798 CWH43Q9H720 699 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 HSFX1Q9UBD0 423 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 FBXO5Q9UKT4 447 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 PLXNA4Q9HCM2 1894 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 ANAPC1Q9H1A4 1944 aa13.91□□□□□ -0.18
RTN3-210ENST00000540798 H3BNC9 293 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 PHGDHO43175 533 aaKnown RBP13.9□□□□□ -0.18
RTN3-210ENST00000540798 PARNO95453 639 aaKnown RBP13.9□□□□□ -0.18
RTN3-210ENST00000540798 OR1E1P30953 314 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 SLC6A4P31645 630 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 KCNQ1P51787 676 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 POU4F1Q01851 419 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 ACVR1Q04771 509 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 THOC5Q13769 683 aaKnown RBP13.9□□□□□ -0.18
RTN3-210ENST00000540798 SLC14A2Q15849 920 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 SIRPB2Q5JXA9 342 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 TMCO4Q5TGY1 634 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 LIPMQ5VYY2 423 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 ZNF470Q6ECI4 717 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 NEPROQ6NW34 567 aa13.9□□□□□ -0.18
RTN3-210ENST00000540798 TEX9Q8N6V9 391 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms