RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 SNX25Q9H3E2 840 aa12.99□□□□□ -0.33
SFSWAP-209ENST00000540469 CORINQ9Y5Q5 1042 aa12.99□□□□□ -0.33
SFSWAP-209ENST00000540469 DGKBQ9Y6T7 804 aa12.99□□□□□ -0.33
SFSWAP-209ENST00000540469 OXSR1O95747 527 aaPredicted RBP12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 HK2P52789 917 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 NFATC3Q12968 1075 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 CERCAMQ5T4B2 595 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 MAMDC4Q6UXC1 1216 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 SLC41A1Q8IVJ1 513 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 C1orf127Q8N9H9 656 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 OR9I1Q8NGQ6 314 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 KCTD15Q96SI1 283 aaPredicted RBP12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 SLC25A23Q9BV35 468 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 NT5C1AQ9BXI3 368 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 MRPL46Q9H2W6 279 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 FANCEQ9HB96 536 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 UBP1Q9NZI7 540 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 ACOT9Q9Y305 439 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 BTAF1O14981 1849 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 DYTNA2CJ06 578 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 EI24O14681 340 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 PLK1P53350 603 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 TRAP1Q12931 704 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 GRM1Q13255 1194 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 NCBP2-AS2Q69YL0 99 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 XRRA1Q6P2D8 792 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 ACOT1Q86TX2 421 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 SEPT8Q92599 483 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 PRDM12Q9H4Q4 367 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 POMKQ9H5K3 350 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 ANKRD12Q6UB98 2062 aa12.98□□□□□ -0.33
SFSWAP-209ENST00000540469 NR5A2O00482 541 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 B4GALT5O43286 388 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 NRP2O60462 931 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 MT-ND1P03886 318 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 PPIL2Q13356 520 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 OTUD3Q5T2D3 398 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 EEF1DP3Q658K8 133 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SLC2A7Q6PXP3 512 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ERO1BQ86YB8 467 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 CCDC185Q8N715 623 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ANKRD52Q8NB46 1076 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 CDH7Q9ULB5 785 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SDHDO14521 159 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 INPP4BO15327 924 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SNAP91O60641 907 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 MSCO60682 206 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ATP6V1B2P21281 511 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 MYF6P23409 242 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SNX16P57768 344 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SQLEQ14534 574 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 RPS6KA2Q15349 733 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ZIK1Q3SY52 487 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 MAP1SQ66K74 1059 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ZNF567Q8N184 647 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ANKFN1Q8N957 763 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 RDH11Q8TC12 318 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ITPKCQ96DU7 683 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 IL22Q9GZX6 179 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 RAD21L1Q9H4I0 556 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 CHRAC1Q9NRG0 131 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SIX4Q9UIU6 781 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 TMEM98Q9Y2Y6 226 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ST14Q9Y5Y6 855 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 TCRBV3S1A0A5B6 114 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 NEMP2A6NFY4 417 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 DLX3O60479 287 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 TOMM70O94826 608 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 PRKAA2P54646 552 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 RAD23AP54725 363 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 PPP1R3AQ16821 1122 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 ACDQ96AP0 544 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 SACM1LQ9NTJ5 587 aa12.97□□□□□ -0.33
SFSWAP-209ENST00000540469 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 RGS20O76081 388 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 ALBP02768 609 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 DCKP27707 260 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 STAT5BP51692 787 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 TSPY1Q01534 308 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 LAMTOR4Q0VGL1 99 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 DPYSL2Q16555 572 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 CYP51A1Q16850 503 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 JADE1Q6IE81 842 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 DDIASQ8IXT1 998 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 LPAR1Q92633 364 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 NXNL1Q96CM4 212 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 ZMAT2Q96NC0 199 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 BCO2Q9BYV7 579 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 BRWD3Q6RI45 1802 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 ZBBXA8MT70 800 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms