RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 EFL1Q7Z2Z2 1120 aaKnown RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 RYBPQ8N488 228 aaPredicted RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 EMC1Q8N766 993 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 LMX1AQ8TE12 382 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 SNRNP27Q8WVK2 155 aaKnown RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 RXFP2Q8WXD0 754 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 CASKIN2Q8WXE0 1202 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 CPA5Q8WXQ8 436 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 GLMNQ92990 594 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 NAT6Q93015 286 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 VOPP1Q96AW1 172 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 CENPTQ96BT3 561 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 NAF1Q96HR8 494 aaKnown RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 BOCQ9BWV1 1114 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 METTL5Q9NRN9 209 aaKnown RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 NDFIP2Q9NV92 336 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 ACTL7AQ9Y615 435 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 CPED1A4D0V7 1026 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 LMO7DNF2Z398 122 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 KRIT1O00522 736 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 LRIG2O94898 1065 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 UGT2B4P06133 528 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 EEF1GP26641 437 aaKnown RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 GKP32189 559 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 PTPN9P43378 593 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 THOP1P52888 689 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 SKOR1P84550 965 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 RAD51Q06609 339 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 CDKN3Q16667 212 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 MYLK3Q32MK0 819 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 CCDC14Q49A88 953 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 TPRG1LQ5T0D9 272 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 RWDD4Q6NW29 188 aaKnown RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 RBM44Q6ZP01 1051 aaKnown RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 ZNF605Q86T29 641 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 PHACTR4Q8IZ21 702 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 CENPIQ92674 756 aaPredicted RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 NTAN1Q96AB6 310 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 TBC1D31Q96DN5 1066 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 CCDC97Q96F63 343 aaPredicted RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 VCPIP1Q96JH7 1222 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 SLC46A1Q96NT5 459 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 C1QTNF7Q9BXJ2 289 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 APOBEC3BQ9UH17 382 aaKnown RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 GGT7Q9UJ14 662 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 NOCTQ9UK39 431 aaKnown RBP12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 SATB2Q9UPW6 733 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 NEU3Q9UQ49 428 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 MFHAS1Q9Y4C4 1052 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 DAAM1Q9Y4D1 1078 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 TRPM6Q9BX84 2022 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 BPTFQ12830 3046 aa12.18□□□□□ -0.46
CBX3P4-202ENST00000540428 C2CD4BA6NLJ0 364 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 FAM72CH0Y354 149 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 PES1O00541 588 aaKnown RBP12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 KLK10O43240 276 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 KDELR3O43731 214 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 TM7SF2O76062 418 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 PLA2G2AP14555 144 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 IGFALSP35858 605 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 SUOXP51687 545 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 GSCP56915 257 aaPredicted RBP12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 CDR2Q01850 454 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 CDO1Q16878 200 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 C15orf59Q2T9L4 293 aaPredicted RBP12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 TAF1BQ53T94 588 aaPredicted RBP12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 INO80DQ53TQ3 878 aaPredicted RBP12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 PRRT3Q5FWE3 981 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 C3orf38Q5JPI3 329 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 FAM72AQ5TYM5 149 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 FAM72DQ6L9T8 149 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 GDPD4Q6W3E5 623 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 MACC1Q6ZN28 852 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 TTC7BQ86TV6 843 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 FAM72BQ86X60 149 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 RBFAQ8N0V3 343 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 OR6K2Q8NGY2 324 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 CXorf40AQ8TE69 158 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 GDAP1L1Q96MZ0 367 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 KLHL32Q96NJ5 620 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 SLC13A1Q9BZW2 595 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 TTYH3Q9C0H2 523 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 CLSTN2Q9H4D0 955 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 DKK3Q9UBP4 350 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 DNAI1Q9UI46 699 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 ITM2BQ9Y287 266 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 SHROOM3Q8TF72 1996 aa12.17□□□□□ -0.46
CBX3P4-202ENST00000540428 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 DOCK4Q8N1I0 1966 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 A0A1W2PNU3 283 aaPredicted RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 TMEM110-MUSTN1A8MSY1 372 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms