RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 SLC18A2Q05940 514 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 MTM1Q13496 603 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 QPCTQ16769 361 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 SPANXN3Q5MJ09 141 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 AFMIDQ63HM1 303 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 KCTD11Q693B1 232 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 NAPEPLDQ6IQ20 393 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 CASC4Q6P4E1 433 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 PPM1NQ8N819 430 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 BANPQ8N9N5 519 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 TRMT2BQ96GJ1 504 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 TTLL2Q9BWV7 592 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 TRPC7Q9HCX4 862 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 CASS4Q9NQ75 786 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 TDP1Q9NUW8 608 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 OSER1Q9NX31 292 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 OBP2AQ9NY56 170 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 HS3ST4Q9Y661 456 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 F5P12259 2224 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 IGLV3-10A0A075B6K4 115 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 DFFAO00273 331 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 GFRA3O60609 400 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 SPAG7O75391 227 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 ZDHHC11BP0C7U3 371 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 WEE1P30291 646 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 NBL1P41271 181 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 GRIA1P42261 906 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 PGFP49763 221 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 WDR4P57081 412 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 USP46P62068 366 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 EFEMP1Q12805 493 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 TAF10Q12962 218 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 PDK4Q16654 411 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 C6orf89Q6UWU4 347 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 PRPF39Q86UA1 669 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 ARHGAP12Q8IWW6 846 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 TP53INP2Q8IXH6 220 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 C4orf33Q8N1A6 199 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 UMODL1-AS1Q8N2C9 162 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 OTUD6BQ8N6M0 293 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 MYRFLQ96LU7 910 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 AGAP3Q96P47 875 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 CYP2S1Q96SQ9 504 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 IL12RB2Q99665 862 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 ZYG11BQ9C0D3 744 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 ZMYND15Q9H091 742 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 GKN1Q9NS71 199 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 MKS1Q9NXB0 559 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 MARCH2Q9P0N8 246 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 CCL26Q9Y258 94 aa12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 HBS1LQ9Y450 684 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-215ENST00000540317 COL4A3Q01955 1670 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 SHISA7A6NL88 538 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 ARNTLO00327 626 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 MOCS2O96007 188 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 JCHAINP01591 159 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 IGLV3-27P01718 113 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 MGAT1P26572 445 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 CD68P34810 354 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 RPA3P35244 121 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 MAGEA9P43362 315 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 SOX9P48436 509 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 GEMP55040 296 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 CORO7P57737 925 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 SESN2P58004 480 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 TNK2Q07912 1038 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 C10orf120Q5SQS8 335 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 SNX30Q5VWJ9 437 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 CCDC117Q8IWD4 279 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 MPP5Q8N3R9 675 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 NETO2Q8NC67 525 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 USP13Q92995 863 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 CLDN23Q96B33 292 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 APOPT1Q96IL0 206 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 CELF6Q96J87 481 aaKnown RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 FCRL5Q96RD9 977 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 SLC39A8Q9C0K1 460 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 IL22Q9GZX6 179 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 VPS11Q9H270 941 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 C8orf33Q9H7E9 229 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 PLAC1Q9HBJ0 212 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 VANGL2Q9ULK5 521 aa12.12□□□□□ -0.47
CYB561A3-215ENST00000540317 TRAV19A0A0A6YYK7 116 aa12.11□□□□□ -0.47
CYB561A3-215ENST00000540317 PROB1E7EW31 1015 aa12.11□□□□□ -0.47
CYB561A3-215ENST00000540317 SNX3O60493 162 aa12.11□□□□□ -0.47
CYB561A3-215ENST00000540317 MAFKO60675 156 aa12.11□□□□□ -0.47
CYB561A3-215ENST00000540317 NEBLO76041 1014 aa12.11□□□□□ -0.47
CYB561A3-215ENST00000540317 CKMP06732 381 aa12.11□□□□□ -0.47
CYB561A3-215ENST00000540317 SP9P0CG40 484 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms