RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 HSPA9P38646 679 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CETN2P41208 172 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 MMP13P45452 471 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CSNK1DP48730 415 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 IFI35P80217 286 aaPredicted RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 RPL6Q02878 288 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 KCNC4Q03721 635 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 NSUN2Q08J23 767 aaKnown RBP eCLIP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ZBTB17Q13105 803 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 KLF1Q13351 362 aaPredicted RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 BYSLQ13895 437 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 HNRNPDQ14103 355 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 SIM2Q14190 667 aaPredicted RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 PDK1Q15118 436 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 NOMO1Q15155 1222 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 MYLK3Q32MK0 819 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 POM121L1PQ3SYA9 428 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 PLK5Q496M5 336 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 PIP5KL1Q5T9C9 394 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 SEL1L2Q5TEA6 688 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 MARC1Q5VT66 337 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 AGBL4Q5VU57 503 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 FAM46CQ5VWP2 391 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 PMS2CLQ68D20 193 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ALG1LQ6GMV1 187 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CEP68Q76N32 757 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 FAM124AQ86V42 546 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 C11orf74Q86VG3 221 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CCDC13Q8IYE1 715 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 SUMF1Q8NBK3 374 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CCNYQ8ND76 341 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 NSMCE1Q8WV22 266 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 P3H4Q92791 437 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ARRDC3Q96B67 414 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 TOE1Q96GM8 510 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 PPP1R16AQ96I34 528 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 LRIG1Q96JA1 1093 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ZC3H10Q96K80 434 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 QKIQ96PU8 341 aaKnown RBP eCLIP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 NUDCD1Q96RS6 583 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 PHOX2BQ99453 314 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 MGME1Q9BQP7 344 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 OSBPL1AQ9BXW6 950 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CPEB1Q9BZB8 566 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 BRD8Q9H0E9 1235 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 DUSP15Q9H1R2 295 aaPredicted RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CARD9Q9H257 536 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 TRMT1Q9NXH9 659 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 FBXL12Q9NXK8 326 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 WSB2Q9NYS7 404 aaPredicted RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 AMACRQ9UHK6 382 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 EVLQ9UI08 416 aaPredicted RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ADAMTS9Q9P2N4 1935 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 BPTFQ12830 3046 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 CFAP54Q96N23 3096 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 TCRBV7S2A1N4TA0A589 114 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 TSPAN11A1L157 253 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 GOLGA6L9A6NEM1 432 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 HACD1B0YJ81 288 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 KCNK1O00180 336 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 PLK4O00444 970 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 ENC1O14682 589 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 INSIG1O15503 277 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SLC7A4O43246 635 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 PLRG1O43660 514 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 TJP3O95049 919 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 POP4O95707 220 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SEMA4FO95754 770 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 HLA-DQB2P05538 268 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 UGT2B4P06133 528 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 CCNB1P14635 433 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 OXTRP30559 389 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 MAPK8P45983 427 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 RENBPP51606 427 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 ADPRHP54922 357 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 MAXP61244 160 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 AP1S1P61966 158 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 OTUD4Q01804 1114 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 RAD51Q06609 339 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 AP1B1Q10567 949 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 CNTN1Q12860 1018 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SFSWAPQ12872 951 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 GRM3Q14832 879 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 RPS6KA1Q15418 735 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 ELF2Q15723 593 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SLC45A4Q5BKX6 768 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF805Q5CZA5 627 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 RALGPS1Q5JS13 557 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SPDYCQ5MJ68 293 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 LAIR1Q6GTX8 287 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SLC36A4Q6YBV0 504 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 PRR23BQ6ZRT6 265 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 B4GALNT4Q76KP1 1039 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 BZW1Q7L1Q6 419 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 PARS2Q7L3T8 475 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SRLQ86TD4 932 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 ZC3H18Q86VM9 953 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SLC35F6Q8N357 371 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 BBS5Q8N3I7 341 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 RYBPQ8N488 228 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms