RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 CXorf51AA0A1B0GTR3 108 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
COPS3-212ENST00000539941 EPOP01588 193 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 SERPINB9P50453 376 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 MAXP61244 160 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 USP4Q13107 963 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 INO80DQ53TQ3 878 aaPredicted RBP17.09■□□□□ 0.33
COPS3-212ENST00000539941 TRMT10BQ6PF06 316 aaKnown RBP17.09■□□□□ 0.33
COPS3-212ENST00000539941 MARK2Q7KZI7 788 aaKnown RBP17.09■□□□□ 0.33
COPS3-212ENST00000539941 RBM23Q86U06 439 aaKnown RBP17.09■□□□□ 0.33
COPS3-212ENST00000539941 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 SRRM1Q8IYB3 904 aaKnown RBP17.09■□□□□ 0.33
COPS3-212ENST00000539941 KIAA1958Q8N8K9 716 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
COPS3-212ENST00000539941 CENPTQ96BT3 561 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 SEMA3CQ99985 751 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 SELENOSQ9BQE4 189 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 SFXN1Q9H9B4 322 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 TBC1D14Q9P2M4 693 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 OR51B4Q9Y5P0 310 aa17.09■□□□□ 0.33
COPS3-212ENST00000539941 CBX4O00257 560 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 ATP9BO43861 1147 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 ZMPSTE24O75844 475 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 BRAFP15056 766 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 WEE1P30291 646 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 MGAT5Q09328 741 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 ANKRD20A4Q4UJ75 823 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 FSCBQ5H9T9 825 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 MIA3Q5JRA6 1907 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 FYB2Q5VWT5 728 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 AP1ARQ63HQ0 302 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 ZNF557Q8N988 423 aaPredicted RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 FIBINQ8TAL6 211 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 PPP2R3CQ969Q6 453 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 ZNF669Q96BR6 464 aaPredicted RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 OTUB2Q96DC9 234 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 MRRFQ96E11 262 aaKnown RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 CERS2Q96G23 380 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 FEM1CQ96JP0 617 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 FAM210AQ96ND0 272 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 SMG9Q9H0W8 520 aaKnown RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 TRABDQ9H4I3 376 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 CERS4Q9HA82 394 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 KIF9Q9HAQ2 790 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 PIDD1Q9HB75 910 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 SLC40A1Q9NP59 571 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 SSU72Q9NP77 194 aaKnown RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 SMYD2Q9NRG4 433 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 DZANK1Q9NVP4 752 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 VPS28Q9UK41 221 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 CCL26Q9Y258 94 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 MRPS23Q9Y3D9 190 aaKnown RBP17.08■□□□□ 0.32
COPS3-212ENST00000539941 UNC80Q8N2C7 3258 aa17.08■□□□□ 0.32
COPS3-212ENST00000539941 LOC285095A0A1B0GVY8 99 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 CXorf49A8MYA2 514 aaPredicted RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 MUSKO15146 869 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 FAM155BO75949 473 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 KRT37O76014 449 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 SERPINF2P08697 491 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 CNTFP26441 200 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 CSKP41240 450 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 NRIP1P48552 1158 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 SLC18A1P54219 525 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 NTHL1P78549 312 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 ARF5P84085 180 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 SLC12A1Q13621 1099 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 ZNF77Q15935 545 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 PKN3Q6P5Z2 889 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 CCDC121Q6ZUS5 278 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 TTC16Q8NEE8 873 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 PPHLN1Q8NEY8 458 aaKnown RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 RNF217Q8TC41 542 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 MZB1Q8WU39 189 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 ACDQ96AP0 544 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 ALKBH8Q96BT7 664 aaKnown RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 MTBPQ96DY7 904 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 ALG14Q96F25 216 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 RANBP9Q96S59 729 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 SMC6Q96SB8 1091 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 C2orf49Q9BVC5 232 aaPredicted RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 SLC28A3Q9HAS3 691 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 KIAA1522Q9P206 1035 aaPredicted RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 PRKAG3Q9UGI9 489 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 SMG5Q9UPR3 1016 aaKnown RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 ZCWPW2A0A1B0GU75 182 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 KRT38O76015 456 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 TPH1P17752 444 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 CR2P20023 1033 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 HLA-DPA1P20036 260 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 GLDCP23378 1020 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 MZF1P28698 734 aaPredicted RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 KCNC3Q14003 757 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 RALGPS1Q5JS13 557 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 TLDC1Q6P9B6 456 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 METTL3Q86U44 580 aaKnown RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 GDPD5Q8WTR4 605 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms