RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ZMPSTE24O75844 475 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 KRT37O76014 449 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 KRT38O76015 456 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 PEX11BO96011 259 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 FCARP24071 287 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 HLA-FP30511 346 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 MAGEA3P43357 314 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 MRPS25P82663 173 aaKnown RBP11.92□□□□□ -0.5
VTN-202ENST00000539746 HTR4Q13639 388 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 SMAD2Q15796 467 aaKnown RBP11.92□□□□□ -0.5
VTN-202ENST00000539746 CARD16Q5EG05 197 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 KCTD11Q693B1 232 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 TANGO2Q6ICL3 276 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 C22orf39Q6P5X5 142 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 RANBP10Q6VN20 620 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 C3orf62Q6ZUJ4 267 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 CCDC91Q7Z6B0 441 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 ETFBKMTQ8IXQ9 262 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 RYBPQ8N488 228 aaPredicted RBP11.92□□□□□ -0.5
VTN-202ENST00000539746 CNTD1Q8N815 330 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 TERB1Q8NA31 727 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 FBXO36Q8NEA4 188 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 USP33Q8TEY7 942 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 BHMTQ93088 406 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 RMDN1Q96DB5 314 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 MYADMQ96S97 322 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 FAM167BQ9BTA0 163 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 FUT8Q9BYC5 575 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 CDC42EP4Q9H3Q1 356 aaKnown RBP11.92□□□□□ -0.5
VTN-202ENST00000539746 EBF3Q9H4W6 596 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 ERVW-1Q9UQF0 538 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 DENND4CQ5VZ89 1909 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 IQANK1A0A1B0GTG1 560 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 LOC285095A0A1B0GVY8 99 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 WASH3PC4AMC7 463 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 GOLGA8MH3BSY2 632 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 MAP2K7O14733 419 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 RASGRF2O14827 1237 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 MBTPS2O43462 519 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 SYNCRIPO60506 623 aaKnown RBP11.91□□□□□ -0.5
VTN-202ENST00000539746 PMPCBO75439 489 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 INHBAP08476 426 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 CYP2A6P11509 494 aaPredicted RBP11.91□□□□□ -0.5
VTN-202ENST00000539746 MZF1P28698 734 aaPredicted RBP11.91□□□□□ -0.5
VTN-202ENST00000539746 CD70P32970 193 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 LTBRP36941 435 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 POLD2P49005 469 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 IRAK1P51617 712 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 ARF5P84085 180 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 DNAJC3Q13217 504 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 ELAVL3Q14576 367 aaKnown RBP11.91□□□□□ -0.5
VTN-202ENST00000539746 NAA30Q147X3 362 aaPredicted RBP11.91□□□□□ -0.5
VTN-202ENST00000539746 SLC1A5Q15758 541 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 FNDC3BQ53EP0 1204 aaKnown RBP11.91□□□□□ -0.5
VTN-202ENST00000539746 ERAP2Q6P179 960 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 KIAA0408Q6ZU52 694 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 LRRC6Q86X45 466 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 TDRPQ86YL5 185 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 DEFB123Q8N688 67 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 GLIS1Q8NBF1 620 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
VTN-202ENST00000539746 BRSK1Q8TDC3 778 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 OR8D1Q8WZ84 308 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 TADA1Q96BN2 335 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 ALG14Q96F25 216 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 CDX2Q99626 313 aaPredicted RBP11.91□□□□□ -0.5
VTN-202ENST00000539746 P2RY13Q9BPV8 354 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 HEPHQ9BQS7 1158 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 FICDQ9BVA6 458 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 EPC1Q9H2F5 836 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 LINC00597Q9H2U6 94 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 ACSS3Q9H6R3 686 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 PLK2Q9NYY3 685 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 ZFATQ9P243 1243 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 SCML1Q9UN30 329 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 PLAAQ9Y263 795 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 STARD13Q9Y3M8 1113 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 PKP3Q9Y446 797 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 TEX264Q9Y6I9 313 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 NUMBLQ9Y6R0 609 aa11.91□□□□□ -0.5
VTN-202ENST00000539746 RGS16O15492 202 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 TMEM63AO94886 807 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 KAT7O95251 611 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 ACSL3O95573 720 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 ZNF30P17039 623 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 CR2P20023 1033 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 CD68P34810 354 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 GJA4P35212 333 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 ELK3P41970 407 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 MSH2P43246 934 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 SGSHP51688 502 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 SESN2P58004 480 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 SKOR1P84550 965 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 ELP6Q0PNE2 266 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 THOC5Q13769 683 aaKnown RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 ADGRE1Q14246 886 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms