RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 VNN2O95498 520 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 CSF1P09603 554 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 DHRS4L1P0CG22 281 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 IGHV4-30-4P0DP06 118 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 CD72P21854 359 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 MTNR1AP48039 350 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 BRWD1-AS2P59051 145 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 FAM69BQ5VUD6 431 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 SULT6B1Q6IMI4 303 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 KLHL17Q6TDP4 642 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 TRMT1LQ7Z2T5 733 aaKnown RBP5.24□□□□□ -1.57
CCDC7-209ENST00000539197 FAM186BQ8IYM0 893 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 ATG16L2Q8NAA4 619 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 KBTBD3Q8NAB2 608 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 ZNF527Q8NB42 609 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 TRIB2Q92519 343 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 PLEKHA2Q9HB19 425 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 LRRC4Q9HBW1 653 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 MORC2Q9Y6X9 1032 aaPredicted RBP5.24□□□□□ -1.57
CCDC7-209ENST00000539197 SHROOM4Q9ULL8 1493 aa5.24□□□□□ -1.57
CCDC7-209ENST00000539197 OR6C68A6NDL8 312 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 FAM157AC9JC47 383 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 PMS2P2O95744 297 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 MYF6P23409 242 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 VEGFCP49767 419 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 MVDP53602 400 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 PHEXP78562 749 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 FAM27E3Q08E93 113 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 IL13RA2Q14627 380 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 LPIN1Q14693 890 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 ME3Q16798 604 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 FBXO43Q4G163 708 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 SYT13Q7L8C5 426 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 CCDC117Q8IWD4 279 aaPredicted RBP5.23□□□□□ -1.57
CCDC7-209ENST00000539197 AADATQ8N5Z0 425 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 ZNF441Q8N8Z8 693 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 OTUD7AQ8TE49 926 aaPredicted RBP5.23□□□□□ -1.57
CCDC7-209ENST00000539197 TRAPPC9Q96Q05 1148 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 CSF3RQ99062 836 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 SCRT2Q9NQ03 307 aa5.23□□□□□ -1.57
CCDC7-209ENST00000539197 A0A087WV62 115 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 HNRNPCL2B2RXH8 293 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 SLC25A17O43808 307 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 KDM4BO94953 1096 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 NLRP5P59047 1200 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 PICALMQ13492 652 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 RUNDC3AQ59EK9 446 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 MARK2Q7KZI7 788 aaKnown RBP5.22□□□□□ -1.57
CCDC7-209ENST00000539197 KLHDC8BQ8IXV7 354 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 CIARTQ8N365 385 aaPredicted RBP5.22□□□□□ -1.57
CCDC7-209ENST00000539197 DUX3Q96PT4 197 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 MMTAG2Q9BU76 263 aaKnown RBP5.22□□□□□ -1.57
CCDC7-209ENST00000539197 ARFGAP3Q9NP61 516 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 LRFN1Q9P244 771 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 GAB2Q9UQC2 676 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 MMP24Q9Y5R2 645 aa5.22□□□□□ -1.57
CCDC7-209ENST00000539197 hDV102S1A0JD36 115 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 FAM172BPA6NC97 362 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 ZG16O60844 167 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 GAGE7O76087 117 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 IL1AP01583 271 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 CRYAAP02489 173 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 GAGE12FP0CL80 117 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 GAGE12GP0CL81 117 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 GAGE12IP0CL82 117 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 SERPINF1P36955 418 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 ZNF132P52740 706 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 SLC18A2Q05940 514 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 GAGE1Q13065 139 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 GAGE4Q13068 117 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 BYSLQ13895 437 aaKnown RBP5.21□□□□□ -1.58
CCDC7-209ENST00000539197 ACCSLQ4AC99 568 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 FOXL2NBQ6ZUU3 175 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 MON1AQ86VX9 555 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 MB21D2Q8IYB1 491 aaPredicted RBP5.21□□□□□ -1.58
CCDC7-209ENST00000539197 FSIP1Q8NA03 581 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 SETD9Q8NE22 299 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 MCPH1Q8NEM0 835 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 ARRDC2Q8TBH0 407 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 TAF15Q92804 592 aaKnown RBP eCLIP5.21□□□□□ -1.58
CCDC7-209ENST00000539197 FBXO17Q96EF6 278 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 LRFN5Q96NI6 719 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 SMARCAL1Q9NZC9 954 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 OR6C3Q9NZP0 311 aa5.21□□□□□ -1.58
CCDC7-209ENST00000539197 SYT5O00445 386 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 LDLRP01130 860 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 TAF6P49848 677 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 ARHGAP8P85298 464 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 ECT2LQ008S8 904 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 ZBTB17Q13105 803 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 RPE65Q16518 533 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 SH2D4BQ5SQS7 431 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 CCDC129Q6ZRS4 1044 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 LRRC8CQ8TDW0 803 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 YME1L1Q96TA2 773 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 CTDSP1Q9GZU7 261 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 EBF2Q9HAK2 575 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 ATP8A2Q9NTI2 1148 aa5.2□□□□□ -1.58
CCDC7-209ENST00000539197 ANTXRLA6NF34 631 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 H0Y3Z8 333 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms