RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 OSBPL2Q9H1P3 480 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 TASP1Q9H6P5 420 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 CYP4F11Q9HBI6 524 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 CSNK1G1Q9HCP0 422 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 MAN1C1Q9NR34 630 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 PRPF19Q9UMS4 504 aaKnown RBP14.73□□□□□ -0.05
CDCA3-207ENST00000538862 SSX2IPQ9Y2D8 614 aa14.73□□□□□ -0.05
CDCA3-207ENST00000538862 YBX2Q9Y2T7 364 aaKnown RBP14.73□□□□□ -0.05
CDCA3-207ENST00000538862 RGSL1A5PLK6 1076 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PDE5AO76074 875 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 DDHD2O94830 711 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PARNO95453 639 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 TPH1P17752 444 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 CCNCP24863 283 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PEX19P40855 299 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 WDR5P61964 334 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 SLC12A1Q13621 1099 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 SEL1L3Q68CR1 1132 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 SETD3Q86TU7 594 aaPredicted RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 KBTBD6Q86V97 674 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 HPS6Q86YV9 775 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 CNTN4Q8IWV2 1026 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 CPSF7Q8N684 471 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 ACVR1CQ8NER5 493 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 RP9Q8TA86 221 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 LENG8Q96PV6 779 aaPredicted RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 OR52B2Q96RD2 323 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 TMEM30AQ9NV96 361 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 COL4A4P53420 1690 aaPredicted RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 CASQ2O14958 399 aaPredicted RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PEX1O43933 1283 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 THP07101 528 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 SBK3P0C264 359 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 IGFBP6P24592 240 aaPredicted RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PCSK1P29120 753 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 ABCG1P45844 678 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 GRIA4P48058 902 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 MGAT3Q09327 533 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 USP10Q14694 798 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 RNF220Q5VTB9 566 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PKN3Q6P5Z2 889 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 C16orf89Q6UX73 402 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 ACAD11Q709F0 780 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 CNTD1Q8N815 330 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 STYXQ8WUJ0 223 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PDCD6IPQ8WUM4 868 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 TIFAQ96CG3 184 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 PPP1R2P1Q96PQ5 205 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 SERPINI1Q99574 410 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 NKX2-4Q9H2Z4 354 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 CPSF2Q9P2I0 782 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 ADAMTS6Q9UKP5 1117 aa14.72□□□□□ -0.05
CDCA3-207ENST00000538862 RUVBL2Q9Y230 463 aaKnown RBP14.72□□□□□ -0.05
CDCA3-207ENST00000538862 ANXA9O76027 345 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 SORBS2O94875 1100 aaKnown RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 SNUPNO95149 360 aaKnown RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 F7P08709 466 aaPredicted RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 UBTFL6P0CB48 400 aaPredicted RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 TFEBP19484 476 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 PIK3R1P27986 724 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 MRPS6P82932 125 aaKnown RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 FAM26DQ5JW98 314 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 FAM117BQ6P1L5 589 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 BEND5Q7L4P6 421 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 ZNF483Q8TF39 744 aaPredicted RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 PTCD2Q8WV60 388 aaKnown RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 EDEM1Q92611 657 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 CCDC124Q96CT7 223 aaKnown RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 GUCD1Q96NT3 240 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 FCRL5Q96RD9 977 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 TRIM62Q9BVG3 475 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 UBP1Q9NZI7 540 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 STK39Q9UEW8 545 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 VPS28Q9UK41 221 aa14.71□□□□□ -0.05
CDCA3-207ENST00000538862 MAGED2Q9UNF1 606 aaPredicted RBP14.71□□□□□ -0.05
CDCA3-207ENST00000538862 TARM1B6A8C7 271 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 TK2O00142 265 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 BAIAP3O94812 1187 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 PIGNO95427 931 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 AHSGP02765 367 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 CHRNGP07510 517 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 SLC35E2BP0CK96 405 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 PIM1P11309 404 aaPredicted RBP14.7□□□□□ -0.06
CDCA3-207ENST00000538862 UQCRBP14927 111 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 MPSTP25325 297 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 RPL9P32969 192 aaKnown RBP14.7□□□□□ -0.06
CDCA3-207ENST00000538862 HTR7P34969 479 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 CLCNKBP51801 687 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 IKBKEQ14164 716 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 HERC3Q15034 1050 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 LSM12Q3MHD2 195 aaKnown RBP14.7□□□□□ -0.06
CDCA3-207ENST00000538862 ARL13AQ5H913 290 aaPredicted RBP14.7□□□□□ -0.06
CDCA3-207ENST00000538862 OTOP3Q7RTS5 596 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 KYQ8NBH2 561 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 GDPD5Q8WTR4 605 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 TBL1YQ9BQ87 522 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 EBF3Q9H4W6 596 aa14.7□□□□□ -0.06
CDCA3-207ENST00000538862 MRM3Q9HC36 420 aaKnown RBP14.7□□□□□ -0.06
CDCA3-207ENST00000538862 ACOT9Q9Y305 439 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms