RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 C16orf96A6NNT2 1141 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 TRAFD1O14545 582 aaPredicted RBP13.89□□□□□ -0.19
CD9-208ENST00000538834 VILLO15195 856 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 MFSD11O43934 449 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 BNIP3LO60238 219 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 WNT1P04628 370 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 ZNF883P0CG24 379 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 GNSP15586 552 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 COMTP21964 271 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 SERPINB6P35237 376 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 ABL2P42684 1182 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 NEK3P51956 506 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 RHOAP61586 193 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 CCDC15Q0P6D6 951 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 GRM3Q14832 879 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 ZNF284Q2VY69 593 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 AASDHQ4L235 1098 aaPredicted RBP13.89□□□□□ -0.19
CD9-208ENST00000538834 C11orf63Q6NUN7 778 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 PIP4P1Q86T03 277 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 MAP7D3Q8IWC1 876 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 RGL4Q8IZJ4 473 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 PGBD5Q8N414 524 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 ZCCHC9Q8N567 271 aaKnown RBP13.89□□□□□ -0.19
CD9-208ENST00000538834 TMEM145Q8NBT3 493 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 TPCN2Q8NHX9 752 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 GRIN3AQ8TCU5 1115 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 ASB12Q8WXK4 309 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 PPP1R16AQ96I34 528 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 TUBGCP5Q96RT8 1024 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 BAG1Q99933 345 aaPredicted RBP13.89□□□□□ -0.19
CD9-208ENST00000538834 FSCN3Q9NQT6 498 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 GPR27Q9NS67 375 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 DMTF1Q9Y222 760 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 DUSP10Q9Y6W6 482 aa13.89□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3DA0A087WVF3 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3IA0A087WXS9 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3EA0A087X179 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3KA0A087X1G2 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3FA6NER0 549 aaPredicted RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 C4orf47A7E2U8 309 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3LB9A6J9 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 RNGTTO60942 597 aaKnown RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 FSBPO95073 299 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 IGSF6O95976 241 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3HP0C7X1 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TIMP2P16035 220 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 GARSP41250 739 aaKnown RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 CTSKP43235 329 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 AFF3P51826 1226 aaKnown RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 VAV2P52735 878 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 GRIK2Q13002 908 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 HNRNPDQ14103 355 aaKnown RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 FGL2Q14314 439 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 KRT81Q14533 505 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 IHHQ14623 411 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 LBRQ14739 615 aaKnown RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 SPA17Q15506 151 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 ZNF423Q2M1K9 1284 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 POM121L1PQ3SYA9 428 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3GQ6DHY5 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3CQ6IPX1 549 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 GDPD4Q6W3E5 623 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 SRLQ86TD4 932 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 IQCHQ86VS3 1027 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 ZSCAN30Q86W11 494 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 HORMAD1Q86X24 394 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TBC1D3Q8IZP1 549 aaPredicted RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 LRRC57Q8N9N7 239 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 KCTD6Q8NC69 237 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 OR6K2Q8NGY2 324 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 GANCQ8TET4 914 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 ZNF641Q96N77 438 aaPredicted RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 KLHL32Q96NJ5 620 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 MGME1Q9BQP7 344 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 C1QTNF2Q9BXJ5 285 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 SUV39H2Q9H5I1 410 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 ZDHHC6Q9H6R6 413 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 TMEM9BQ9NQ34 198 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 DTLQ9NZJ0 730 aa13.88□□□□□ -0.19
CD9-208ENST00000538834 CDV3Q9UKY7 258 aaKnown RBP13.88□□□□□ -0.19
CD9-208ENST00000538834 ZFC3H1O60293 1989 aaKnown RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 SCN8AQ9UQD0 1980 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 DFFAO00273 331 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 KRIT1O00522 736 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 HTRA2O43464 458 aaPredicted RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 PSTPIP1O43586 416 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 PALMO75781 387 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 UGT2B4P06133 528 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 SYPP08247 313 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 CD59P13987 128 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 CCNCP24863 283 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 HSPA9P38646 679 aaKnown RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 CDKN2BP42772 138 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 CSNK1EP49674 416 aaKnown RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 DNA2P51530 1060 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 SUOXP51687 545 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 GBE1Q04446 702 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 RAD51Q06609 339 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms