RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 NNMTP40261 264 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 HNRNPDQ14103 355 aaKnown RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 GAS6Q14393 721 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 KCNJ11Q14654 390 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 E2F5Q15329 346 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ANKRD20A2Q5SQ80 823 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 UBAP2Q5T6F2 1119 aaKnown RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 ANKRD20A1Q5TYW2 823 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ANKRD20A3Q5VUR7 823 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 SERPINA13PQ6UXR4 307 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ARHGEF18Q6ZSZ5 1173 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 TRMT11Q7Z4G4 463 aaKnown RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 PCGF5Q86SE9 256 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 PGBD5Q8N414 524 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 TXNDC5Q8NBS9 432 aaKnown RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 NSMCE1Q8WV22 266 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 GABRG3Q99928 467 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 CINPQ9BW66 212 aaPredicted RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 COL25A1Q9BXS0 654 aaPredicted RBP17.47■□□□□ 0.39
CLN6-202ENST00000538696 TNKS2Q9H2K2 1166 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 CHRDQ9H2X0 955 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 VIPAS39Q9H9C1 493 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ETNK1Q9HBU6 452 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 ATP8A1Q9Y2Q0 1164 aa17.47■□□□□ 0.39
CLN6-202ENST00000538696 TRIOO75962 3097 aa17.46■□□□□ 0.39
CLN6-202ENST00000538696 CHURC1-FNTBB4DL54 471 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 F5H423 210 aaPredicted RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 TNFRSF10AO00220 468 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 MUSKO15146 869 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 OPHN1O60890 802 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 ZNF189O75820 626 aaPredicted RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 STK10O94804 968 aaKnown RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 HLA-DQB2P05538 268 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 CCNB1P14635 433 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 COL9A1P20849 921 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 MMP13P45452 471 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 RGRP47804 291 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 PMS2P54278 862 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 RHOAP61586 193 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 ZNF235Q14590 738 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 HNRNPA1L2Q32P51 320 aaKnown RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 ACCSLQ4AC99 568 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 HSF5Q4G112 596 aaPredicted RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 MARC1Q5VT66 337 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 Q6ZVU0 165 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 METTL3Q86U44 580 aaKnown RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 HOOK3Q86VS8 718 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 ZNF567Q8N184 647 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 PCDH20Q8N6Y1 951 aaKnown RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 PTPRN2Q92932 1015 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 FOXP3Q9BZS1 431 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 TM6SF2Q9BZW4 377 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 EPB41L4BQ9H329 900 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 EPHX3Q9H6B9 360 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 POLR3BQ9NW08 1133 aaPredicted RBP17.46■□□□□ 0.38
CLN6-202ENST00000538696 SEPT3Q9UH03 358 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 MMP17Q9ULZ9 603 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 SIT1Q9Y3P8 196 aa17.46■□□□□ 0.38
CLN6-202ENST00000538696 KMT2EQ8IZD2 1858 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 EDDM13A0A1B0GTR0 161 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 GOLGA8MH3BSY2 632 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 MTSS1O43312 755 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 JCHAINP01591 159 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 EPHX1P07099 455 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 DCNP07585 359 aaKnown RBP17.45■□□□□ 0.38
CLN6-202ENST00000538696 MAGEA6P43360 314 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 RPS9P46781 194 aaKnown RBP17.45■□□□□ 0.38
CLN6-202ENST00000538696 RENBPP51606 427 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 SYCP2LQ5T4T6 812 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 ATXN7L2Q5T6C5 722 aaPredicted RBP17.45■□□□□ 0.38
CLN6-202ENST00000538696 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 CNTD1Q8N815 330 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 UBLCP1Q8WVY7 318 aaPredicted RBP17.45■□□□□ 0.38
CLN6-202ENST00000538696 ISG20Q96AZ6 181 aaKnown RBP17.45■□□□□ 0.38
CLN6-202ENST00000538696 EXOC2Q96KP1 924 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 PSKH2Q96QS6 385 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 FERMT1Q9BQL6 677 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 MGME1Q9BQP7 344 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 NT5MQ9NPB1 228 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 RBM22Q9NW64 420 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLN6-202ENST00000538696 DLGAP2Q9P1A6 1054 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 KLHL8Q9P2G9 620 aaPredicted RBP17.45■□□□□ 0.38
CLN6-202ENST00000538696 SLC8A2Q9UPR5 921 aa17.45■□□□□ 0.38
CLN6-202ENST00000538696 PI15O43692 258 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 SIN3BO75182 1162 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 GSRP00390 522 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 HOXB2P14652 356 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 AOC1P19801 751 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 PSMB4P28070 264 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 MAXP61244 160 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 SLMAPQ14BN4 828 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 EOGTQ5NDL2 527 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 CFAP58Q5T655 872 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 C9orf64Q5T6V5 341 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 KIAA1211LQ6NV74 962 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 BBS5Q8N3I7 341 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 ERLEC1Q96DZ1 483 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 ZIM3Q96PE6 472 aa17.44■□□□□ 0.38
CLN6-202ENST00000538696 CDC42EP4Q9H3Q1 356 aaKnown RBP17.44■□□□□ 0.38
CLN6-202ENST00000538696 SEMA4AQ9H3S1 761 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms