RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CCNYL1Q8N7R7 359 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 GPR78Q96P69 363 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 LENG8Q96PV6 779 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 NDNQ99608 321 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 FBXO5Q9UKT4 447 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 SCML2Q9UQR0 700 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 FAM155AB1AL88 458 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 HDAC3O15379 428 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 SKAP2O75563 359 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 SOAT2O75908 522 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 SMNDC1O75940 238 aaKnown RBP eCLIP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 PEX11BO96011 259 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 GLDCP23378 1020 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 CD151P48509 253 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 TBX4P57082 545 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 PSMD5Q16401 504 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 LSM12Q3MHD2 195 aaKnown RBP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 ZNF789Q5FWF6 425 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 CNSTQ6PJW8 725 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 C2CD4AQ8NCU7 369 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 PTCD2Q8WV60 388 aaKnown RBP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 PYDC1Q8WXC3 89 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 SSX2IPQ9Y2D8 614 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 CA12O43570 354 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 UPP2O95045 317 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 JUNP05412 331 aaKnown RBP25.16■■□□□ 1.62
RAB40C-204ENST00000538492 CD86P42081 329 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 PSEN1P49768 467 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 SREBF2Q12772 1141 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 NEPROQ6NW34 567 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 MIB1Q86YT6 1006 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 DCP1BQ8IZD4 617 aaKnown RBP25.16■■□□□ 1.62
RAB40C-204ENST00000538492 ACTRT2Q8TDY3 377 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 SLC39A13Q96H72 371 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 C1orf74Q96LT6 269 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 TBC1D13Q9NVG8 400 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 OAZ2O95190 189 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 COL6A2P12110 1019 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 MS4A13Q5J8X5 152 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 TCHHL1Q5QJ38 904 aaPredicted RBP25.16■■□□□ 1.62
RAB40C-204ENST00000538492 RBM20Q5T481 1227 aaKnown RBP25.16■■□□□ 1.62
RAB40C-204ENST00000538492 KIAA0930Q6ICG6 404 aaPredicted RBP25.16■■□□□ 1.62
RAB40C-204ENST00000538492 KDELC1Q6UW63 502 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 CCDC117Q8IWD4 279 aaPredicted RBP25.16■■□□□ 1.62
RAB40C-204ENST00000538492 LSMEM2Q8N112 164 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 ATAD1Q8NBU5 361 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 SLC25A51Q9H1U9 297 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 MRM3Q9HC36 420 aaKnown RBP25.16■■□□□ 1.62
RAB40C-204ENST00000538492 RGS18Q9NS28 235 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 NDE1Q9NXR1 346 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 DOCK4Q8N1I0 1966 aa25.16■■□□□ 1.62
RAB40C-204ENST00000538492 GRID2O43424 1007 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 DSC1Q08554 894 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 TSTD2Q5T7W7 516 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 METTL21CQ5VZV1 264 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 HPS6Q86YV9 775 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 HIPK4Q8NE63 616 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 B3GALT6Q96L58 329 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 PPP1R2P1Q96PQ5 205 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 ARHGAP26Q9UNA1 814 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 CCNT2O60583 730 aaKnown RBP25.15■■□□□ 1.62
RAB40C-204ENST00000538492 HMBSP08397 361 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 SLC12A2P55011 1212 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 TBL3Q12788 808 aaKnown RBP25.15■■□□□ 1.62
RAB40C-204ENST00000538492 PRKAA1Q13131 559 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 FAM26DQ5JW98 314 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 COLGALT2Q8IYK4 626 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 HEXDCQ8WVB3 486 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 UCMAQ8WVF2 138 aa25.15■■□□□ 1.62
RAB40C-204ENST00000538492 CKBP12277 381 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 CRABP2P29373 138 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 RENBPP51606 427 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 ARPP19P56211 112 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 NRG1Q02297 640 aaPredicted RBP25.14■■□□□ 1.62
RAB40C-204ENST00000538492 DSC2Q02487 901 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 MBTPS1Q14703 1052 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 ZRSR2Q15696 482 aaKnown RBP25.14■■□□□ 1.62
RAB40C-204ENST00000538492 PDCD2Q16342 344 aaPredicted RBP25.14■■□□□ 1.62
RAB40C-204ENST00000538492 PPM1LQ5SGD2 360 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 PGM2L1Q6PCE3 622 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 LCA5Q86VQ0 697 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 RNF135Q8IUD6 432 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 UMODL1-AS1Q8N2C9 162 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 LINC01599Q8WXQ3 324 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 PSMG2Q969U7 264 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 FAM136AQ96C01 138 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 ZYG11BQ9C0D3 744 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 GPAMQ9HCL2 828 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 LRCH1Q9Y2L9 728 aa25.14■■□□□ 1.62
RAB40C-204ENST00000538492 NEMP2A6NFY4 417 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 TMEM233B4DJY2 109 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 LIN7AO14910 233 aaPredicted RBP25.14■■□□□ 1.61
RAB40C-204ENST00000538492 CPB1P15086 417 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 HNRNPDQ14103 355 aaKnown RBP25.14■■□□□ 1.61
RAB40C-204ENST00000538492 IHHQ14623 411 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 MARC1Q5VT66 337 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 TMEM198Q66K66 360 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 NXNQ6DKJ4 435 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 SLC24A5Q71RS6 500 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 LRRC49Q8IUZ0 686 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms