RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ATP5BP06576 529 aaKnown RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 SRPRAP08240 638 aaKnown RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 MGAT1P26572 445 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 SCNN1BP51168 640 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 SNRPD1P62314 119 aaKnown RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 OLIG2Q13516 323 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 PCSK7Q16549 785 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 GEN1Q17RS7 908 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 MTERF4Q7Z6M4 381 aaKnown RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 CROCCP2Q86T23 111 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 PALM2Q8IXS6 379 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 AGGF1Q8N302 714 aaeCLIP12.49□□□□□ -0.41
DDB1-209ENST00000537877 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 NXPE3Q969Y0 559 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 STAMBPL1Q96FJ0 436 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 IFT43Q96FT9 208 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 EXOC2Q96KP1 924 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 BRD9Q9H8M2 597 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 VPS37BQ9H9H4 285 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 NOD2Q9HC29 1040 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 ZC3H7BQ9UGR2 993 aaKnown RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 SLC8A2Q9UPR5 921 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 ERVW-1Q9UQF0 538 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 ARIH1Q9Y4X5 557 aaPredicted RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 MAD1L1Q9Y6D9 718 aa12.49□□□□□ -0.41
DDB1-209ENST00000537877 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.49□□□□□ -0.41
DDB1-209ENST00000537877 BRWD1Q9NSI6 2320 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 MUC22E2RYF6 1773 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 LOC285095A0A1B0GVY8 99 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 MAGEB16A2A368 324 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 K7ERQ8 282 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 SMAD6O43541 496 aaKnown RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 TIMM44O43615 452 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 ATP9BO43861 1147 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 NDST3O95803 873 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 AGTP01019 485 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 DLDP09622 509 aaKnown RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 PGAM1P18669 254 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 GJA4P35212 333 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 NNMTP40261 264 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 OPRD1P41143 372 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 CTSOP43234 321 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 STK19P49842 368 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 CDK18Q07002 472 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 IFFO1Q0D2I5 559 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 GPS2Q13227 327 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 MTM1Q13496 603 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 STAT4Q14765 748 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 SLC1A5Q15758 541 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 CCDC85BQ15834 202 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 HP1BP3Q5SSJ5 553 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 STEAP4Q687X5 459 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 TMEM215Q68D42 235 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 DENND5AQ6IQ26 1287 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 Q7L0L9 218 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 SRLQ86TD4 932 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 PHTF2Q8N3S3 785 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 TERB1Q8NA31 727 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 ST13P5Q8NFI4 369 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 OR2AP1Q8NGE2 309 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 HLA-CQ95604 372 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 RPL10LQ96L21 214 aaKnown RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 TRIB3Q96RU7 358 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 CCDC77Q9BR77 488 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 TMEM109Q9BVC6 243 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 PHF7Q9BWX1 381 aaPredicted RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 TDRD1Q9BXT4 1180 aaKnown RBP12.48□□□□□ -0.41
DDB1-209ENST00000537877 TM6SF2Q9BZW4 377 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 PPCSQ9HAB8 311 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 SYBUQ9NX95 663 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 GTSE1Q9NYZ3 720 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 NFS1Q9Y697 457 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 COL4A2P08572 1712 aa12.48□□□□□ -0.41
DDB1-209ENST00000537877 TTC24A2A3L6 582 aaPredicted RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 C2CD4DB7Z1M9 353 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 TRIM24O15164 1050 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 OPA1O60313 960 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 SOCS5O75159 536 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 IVLP07476 585 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 ATXN1LP0C7T5 689 aaKnown RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 SP100P23497 879 aaPredicted RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 STX2P32856 288 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 GPX6P59796 221 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 KDSRQ06136 332 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 IHHQ14623 411 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 GRM3Q14832 879 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 ATXN7L2Q5T6C5 722 aaPredicted RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 UBAP2Q5T6F2 1119 aaKnown RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 CASC4Q6P4E1 433 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms