RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 BUB1BO60566 1050 aaPredicted RBP13.34□□□□□ -0.27
PRKDC-206ENST00000536429 PALMO75781 387 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 MTA2O94776 668 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 PCDH8O95206 1070 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 MAP3K6O95382 1288 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 IGSF6O95976 241 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 PEX11BO96011 259 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 MAN1A1P33908 653 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 CTSKP43235 329 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 NOVA1P51513 510 aaKnown RBP13.34□□□□□ -0.27
PRKDC-206ENST00000536429 FAM193AP78312 1265 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 TEAD4Q15561 434 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 HADHQ16836 314 aaKnown RBP13.34□□□□□ -0.27
PRKDC-206ENST00000536429 FBXL19Q6PCT2 694 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 TMCO3Q6UWJ1 677 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 GDPD4Q6W3E5 623 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 ADAT2Q7Z6V5 191 aaKnown RBP13.34□□□□□ -0.27
PRKDC-206ENST00000536429 PRPF39Q86UA1 669 aaKnown RBP13.34□□□□□ -0.27
PRKDC-206ENST00000536429 HORMAD1Q86X24 394 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 PCDH19Q8TAB3 1148 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 RFFLQ8WZ73 363 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 RAPGEF5Q92565 580 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 MFSD11O43934 449 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 SH3BP5O60239 455 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 MAFKO60675 156 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 TIMP2P16035 220 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 CD38P28907 300 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 IL9RQ01113 521 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 IL10RBQ08334 325 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 SLC10A7Q0GE19 358 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 N4BP2L1Q5TBK1 243 aaPredicted RBP13.33□□□□□ -0.28
PRKDC-206ENST00000536429 NCBP2-AS2Q69YL0 99 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 NAPEPLDQ6IQ20 393 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 KDM7AQ6ZMT4 941 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 ZSWIM9Q86XI8 627 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 LZTR1Q8N653 840 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 PQLC3Q8N755 202 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 KCTD6Q8NC69 237 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 LRRN4Q8WUT4 740 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 LRIG1Q96JA1 1093 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 CALN1Q9BXU9 219 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 OSBPL1AQ9BXW6 950 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 GOLPH3Q9H4A6 298 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 CAAP1Q9H8G2 361 aa13.33□□□□□ -0.28
PRKDC-206ENST00000536429 PLXNA2O75051 1894 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 IGLON5A6NGN9 336 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 AREL1O15033 823 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 RAD51BO15315 384 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 LCA5LO95447 670 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 CER1O95813 267 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 PRKCGP05129 697 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 CSRP1P21291 193 aaKnown RBP13.32□□□□□ -0.28
PRKDC-206ENST00000536429 FECHP22830 423 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 MAGEA1P43355 309 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 C21orf59P57076 290 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 CLDN2P57739 230 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 LBRQ14739 615 aaKnown RBP13.32□□□□□ -0.28
PRKDC-206ENST00000536429 SHBQ15464 509 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 ZNF423Q2M1K9 1284 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 SETMARQ53H47 684 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-206ENST00000536429 ANKRD20A8PQ5CZ79 823 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 FAM182AQ5T1J6 154 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 IL27RAQ6UWB1 636 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 SPATS2Q86XZ4 545 aaKnown RBP13.32□□□□□ -0.28
PRKDC-206ENST00000536429 CAMK1DQ8IU85 385 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 RHOT2Q8IXI1 618 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 PGBD5Q8N414 524 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 TMEM145Q8NBT3 493 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 FAF2Q96CS3 445 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 ZNF670Q9BS34 389 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 CINPQ9BW66 212 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-206ENST00000536429 TM7SF3Q9NS93 570 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 RCOR3Q9P2K3 495 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-206ENST00000536429 INTUQ9ULD6 942 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 CABIN1Q9Y6J0 2220 aa13.32□□□□□ -0.28
PRKDC-206ENST00000536429 SPAARA0A1B0GVQ0 90 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 RCCD1A6NED2 376 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 C3orf70A6NLC5 250 aaPredicted RBP13.31□□□□□ -0.28
PRKDC-206ENST00000536429 UPK3BL1B0FP48 263 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 UPK3BL2E5RIL1 263 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 PRAMEF26H0Y7S4 382 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 TLR4O00206 839 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 AP1G1O43747 822 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 KRT7P08729 469 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 TNNT1P13805 278 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 KDELR1P24390 212 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 ARHGAP25P42331 645 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 NXPH1P58417 271 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 SEMG2Q02383 582 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 GBE1Q04446 702 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 RAD51Q06609 339 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 CCDC15Q0P6D6 951 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 SLC10A2Q12908 348 aaPredicted RBP13.31□□□□□ -0.28
PRKDC-206ENST00000536429 PAFAH1B3Q15102 231 aaKnown RBP13.31□□□□□ -0.28
PRKDC-206ENST00000536429 PDK2Q15119 407 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms