RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CDH19Q9H159 772 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 THAP1Q9NVV9 213 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 STK39Q9UEW8 545 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 CDY2AQ9Y6F7 541 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 F5H423 210 aaPredicted RBP14.15□□□□□ -0.14
LIG1-203ENST00000536218 NOL3O60936 208 aaKnown RBP14.15□□□□□ -0.14
LIG1-203ENST00000536218 GUCY1B2O75343 617 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 KRT37O76014 449 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 ENO3P13929 434 aaPredicted RBP14.15□□□□□ -0.14
LIG1-203ENST00000536218 MAP4P27816 1152 aaKnown RBP14.15□□□□□ -0.14
LIG1-203ENST00000536218 BCAR1P56945 870 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 MRPS5P82675 430 aaKnown RBP14.15□□□□□ -0.14
LIG1-203ENST00000536218 ROR1Q01973 937 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 TRIM32Q13049 653 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 PGS1Q32NB8 556 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 C16orf46Q6P387 395 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 LYSMD3Q7Z3D4 306 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 OSTM1Q86WC4 334 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 TICAM1Q8IUC6 712 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 SNX29P2Q8IUI4 249 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 KIAA2013Q8IYS2 634 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 FIBCD1Q8N539 461 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 SLC44A1Q8WWI5 657 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 WNT8BQ93098 351 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 PPP1R36Q96LQ0 422 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 ZNF560Q96MR9 790 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 RNF157Q96PX1 679 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 FRMD8Q9BZ67 464 aaPredicted RBP14.15□□□□□ -0.14
LIG1-203ENST00000536218 SIRPGQ9P1W8 387 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 M0QZ92 97 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 KCNN4O15554 427 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 RNASEH2AO75792 299 aaKnown RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 AKR1A1P14550 325 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 CD1EP15812 388 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 KCNA4P22459 653 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 AXLP30530 894 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 BST2Q10589 180 aaKnown RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 TUBB3Q13509 450 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 LRP8Q14114 963 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 MGAT5BQ3V5L5 792 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 PAN2Q504Q3 1202 aaKnown RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 FAAH2Q6GMR7 532 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 TTC33Q6PID6 262 aaPredicted RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 UNC93AQ86WB7 457 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 ANKRD52Q8NB46 1076 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 TRPC4APQ8TEL6 797 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 MED10Q9BTT4 135 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 KATNAL1Q9BW62 490 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 FETUBQ9UGM5 382 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 GABRQQ9UN88 632 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 TMEM63AO94886 807 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 MS4A2Q01362 244 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 E2F2Q14209 437 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 NDUFA5Q16718 116 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 MROH9Q5TGP6 573 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 TTC39BQ5VTQ0 682 aaPredicted RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 SH2D5Q6ZV89 423 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 IGFN1Q86VF2 1251 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 FAM131BQ86XD5 332 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 SGF29Q96ES7 293 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 ZNF778Q96MU6 729 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 CTRCQ99895 268 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 MOSPD1Q9UJG1 213 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 AP4S1Q9Y587 144 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 A0A087WXM4 84 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 TNFRSF10AO00220 468 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 PTGESO14684 152 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 BEST1O76090 585 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 BPGMP07738 259 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 SNRPAP09012 282 aaKnown RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 IL4RP24394 825 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 NDUFV1P49821 464 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 IDH3AP50213 366 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 BCAT1P54687 386 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 TFDP2Q14188 446 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 FASTKD1Q53R41 847 aaKnown RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 BOLA3Q53S33 107 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 ANKRD26P1Q6NSI1 321 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 ZFP1Q6P2D0 407 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 ZC3H7AQ8IWR0 971 aaKnown RBP14.14□□□□□ -0.15
LIG1-203ENST00000536218 SIX6OS1Q8N1H7 587 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 PLD5Q8N7P1 536 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 PCDH19Q8TAB3 1148 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 KLHL3Q9UH77 587 aa14.14□□□□□ -0.15
LIG1-203ENST00000536218 STX16-NPEPL1H3BU86 382 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 AVILO75366 819 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 RBL1P28749 1068 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 ADIGQ0VDE8 80 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 NEDD8Q15843 81 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 GDF6Q6KF10 455 aaPredicted RBP14.13□□□□□ -0.15
LIG1-203ENST00000536218 PIGZQ86VD9 579 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 PYROXD2Q8N2H3 581 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 CALML6Q8TD86 181 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 PDCD6IPQ8WUM4 868 aaKnown RBP14.13□□□□□ -0.15
LIG1-203ENST00000536218 CIB1Q99828 191 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 POLR1BQ9H9Y6 1135 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 TMPRSS4Q9NRS4 437 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 RABL2AQ9UBK7 228 aaPredicted RBP14.13□□□□□ -0.15
LIG1-203ENST00000536218 ABT1Q9ULW3 272 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms