RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TRPM6Q9BX84 2022 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 ATRXP46100 2492 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 A0A087WV48 116 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 TRIM38O00635 465 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 FFAR2O15552 330 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 CCP110O43303 1012 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 TMCC1O94876 653 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 GJB6O95452 261 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 PAK4O96013 591 aaPredicted RBP13.32□□□□□ -0.28
RTN3-207ENST00000536011 UGT2B4P06133 528 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 SUOXP51687 545 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 COL28A1Q2UY09 1125 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 MYLK3Q32MK0 819 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 RAB6CQ53S08 254 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 C19orf48Q6RUI8 117 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 GDPD4Q6W3E5 623 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 SLC22A18ASQ8N1D0 253 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 SLC25A45Q8N413 288 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 OR6K2Q8NGY2 324 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 VCPIP1Q96JH7 1222 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 TTYH3Q9C0H2 523 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 RAB6CQ9H0N0 254 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 GPR27Q9NS67 375 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 AK5Q9Y6K8 562 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 LOC400499M0QZD8 3231 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 CHD5Q8TDI0 1954 aa13.32□□□□□ -0.28
RTN3-207ENST00000536011 ADAMTS20P59510 1910 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 SPTY2D1-AS1A0A0U1RR47 76 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 IGLON5A6NGN9 336 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
RTN3-207ENST00000536011 RNF103O00237 685 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 TOR1BO14657 336 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 SCAMP1O15126 338 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 CREB3O43889 395 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 CD160O95971 181 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 CSF2P04141 144 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 GP1BAP07359 652 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 CKMT1AP12532 417 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 NME1P15531 152 aaKnown RBP13.31□□□□□ -0.28
RTN3-207ENST00000536011 XPAP23025 273 aaPredicted RBP13.31□□□□□ -0.28
RTN3-207ENST00000536011 RHOAP61586 193 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 GRM3Q14832 879 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 RTP5Q14D33 572 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 DCBLD1Q8N8Z6 715 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 FAM181AQ8N9Y4 354 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 BTN2A2Q8WVV5 523 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 HNRNPLLQ8WVV9 542 aaKnown RBP13.31□□□□□ -0.28
RTN3-207ENST00000536011 BAP1Q92560 729 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 KLHL32Q96NJ5 620 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
RTN3-207ENST00000536011 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 MFHAS1Q9Y4C4 1052 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 CSNK1G3Q9Y6M4 447 aa13.31□□□□□ -0.28
RTN3-207ENST00000536011 ARID1BQ8NFD5 2236 aaPredicted RBP13.31□□□□□ -0.28
RTN3-207ENST00000536011 DOCK9Q9BZ29 2069 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 POM121BA6NF01 834 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 WASH4PA8MWX3 477 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 RRP8O43159 456 aaKnown RBP13.3□□□□□ -0.28
RTN3-207ENST00000536011 ABL2P42684 1182 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 ABCG1P45844 678 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 THOP1P52888 689 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 TPI1P60174 286 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
RTN3-207ENST00000536011 ELP6Q0PNE2 266 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 SERINC3Q13530 473 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 PDE1CQ14123 709 aaPredicted RBP13.3□□□□□ -0.28
RTN3-207ENST00000536011 FGL2Q14314 439 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 ATXN7L2Q5T6C5 722 aaPredicted RBP13.3□□□□□ -0.28
RTN3-207ENST00000536011 ZCCHC8Q6NZY4 707 aaKnown RBP13.3□□□□□ -0.28
RTN3-207ENST00000536011 LEKR1Q6ZMV7 388 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 LRRC69Q6ZNQ3 347 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 TTC7BQ86TV6 843 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 UMODL1-AS1Q8N2C9 162 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 ZNF548Q8NEK5 533 aaPredicted RBP13.3□□□□□ -0.28
RTN3-207ENST00000536011 CXorf40AQ8TE69 158 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 BMFQ96LC9 184 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 DKK3Q9UBP4 350 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 FZD10Q9ULW2 581 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 ACTL7AQ9Y615 435 aa13.3□□□□□ -0.28
RTN3-207ENST00000536011 URB1O60287 2271 aaKnown RBP13.3□□□□□ -0.28
RTN3-207ENST00000536011 SMG1Q96Q15 3661 aaKnown RBP13.29□□□□□ -0.28
RTN3-207ENST00000536011 TCRBV5S1A1TA0A578 114 aa13.29□□□□□ -0.28
RTN3-207ENST00000536011 SMTNL1A8MU46 457 aa13.29□□□□□ -0.28
RTN3-207ENST00000536011 RASA4BC9J798 803 aa13.29□□□□□ -0.28
RTN3-207ENST00000536011 AREL1O15033 823 aa13.29□□□□□ -0.28
RTN3-207ENST00000536011 RAD51BO15315 384 aa13.29□□□□□ -0.28
RTN3-207ENST00000536011 RASA4O43374 803 aa13.29□□□□□ -0.28
RTN3-207ENST00000536011 TM7SF2O76062 418 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms