RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 IRX4P78413 519 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 GALNT2Q10471 571 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 BYSLQ13895 437 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 C9orf64Q5T6V5 341 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 Q6ZVU0 165 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 PLD5Q8N7P1 536 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 OR8D1Q8WZ84 308 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 PRCCQ92733 491 aaPredicted RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 MRGPRX1Q96LB2 322 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 MFHAS1Q9Y4C4 1052 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 PCDHB3Q9Y5E6 796 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 K7ERQ8 282 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 MCF2LO15068 1137 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 DDX3YO15523 660 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 SMAD6O43541 496 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 TMCC1O94876 653 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 GARSP41250 739 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 ZNF33AQ06730 810 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 SFSWAPQ12872 951 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 TTC31Q49AM3 519 aaPredicted RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 TIGD7Q6NT04 549 aaPredicted RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 BLOC1S3Q6QNY0 202 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 BZW1Q7L1Q6 419 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 C11orf74Q86VG3 221 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 TMPRSS6Q8IU80 811 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 PGBD3Q8N328 593 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 FRMD1Q8N878 549 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 KDF1Q8NAX2 398 aaPredicted RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 RLN3Q8WXF3 142 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 ALG3Q92685 438 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 GATA6Q92908 595 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 FATE1Q969F0 183 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 HDAC11Q96DB2 347 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 SIPA1Q96FS4 1042 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 SPACA7Q96KW9 195 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 SCNM1Q9BWG6 230 aa12.88□□□□□ -0.35
DDB1-207ENST00000535967 MKRN2Q9H000 416 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 FCF1Q9Y324 198 aaKnown RBP12.88□□□□□ -0.35
DDB1-207ENST00000535967 TP53BP1Q12888 1972 aaPredicted RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 C1QTNF3-AMACRE9PGA6 284 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 J3KR12 359 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 PPP1R12AO14974 1030 aaPredicted RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 KHNYNO15037 678 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 MAFKO60675 156 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 ZNF821O75541 412 aaPredicted RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 ADH1BP00325 375 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 DNTTP04053 509 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 ACADMP11310 421 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 VAV1P15498 845 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 HSPA9P38646 679 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 NR2C2P49116 596 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 RHOAP61586 193 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 SNRPD1P62314 119 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 GBE1Q04446 702 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 USP39Q53GS9 565 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 MEI1Q5TIA1 1274 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 KIAA1324Q6UXG2 1013 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 BBS12Q6ZW61 710 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 CYP2U1Q7Z449 544 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 REXO1L1PQ8IX06 675 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 TP53INP2Q8IXH6 220 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 STK40Q8N2I9 435 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 BBS5Q8N3I7 341 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 DEFB124Q8NES8 71 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 OR2AP1Q8NGE2 309 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 OR2A12Q8NGT7 310 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 TSGA13Q96PP4 275 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 BRD8Q9H0E9 1235 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 MTG2Q9H4K7 406 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 TMEM9BQ9NQ34 198 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 DTLQ9NZJ0 730 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
DDB1-207ENST00000535967 APC2O95996 2303 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 ACACAQ13085 2346 aa12.87□□□□□ -0.35
DDB1-207ENST00000535967 CST8O60676 142 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 IGSF6O95976 241 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 IGLV3-19P01714 112 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 PRNPP04156 253 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 CCNCP24863 283 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 P2RY2P41231 377 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 DHPSP49366 369 aaPredicted RBP12.86□□□□□ -0.35
DDB1-207ENST00000535967 RENBPP51606 427 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 CCNHP51946 323 aaPredicted RBP12.86□□□□□ -0.35
DDB1-207ENST00000535967 PDK1Q15118 436 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 CST6Q15828 149 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 UAP1L1Q3KQV9 507 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 SEL1L2Q5TEA6 688 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 FAM46CQ5VWP2 391 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 ARHGAP36Q6ZRI8 547 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms