RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 GGCXP38435 758 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 TNFRSF4P43489 277 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 TNNT3P45378 269 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 NPY2RP49146 381 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 DGKGP49619 791 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 IRAK1P51617 712 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 SUOXP51687 545 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 BASP1P80723 227 aaKnown RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 LSM11P83369 360 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 RBM10P98175 930 aaKnown RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 PDE1BQ01064 536 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 DLX2Q07687 328 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 CDH17Q12864 832 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 LMAN2Q12907 356 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 ZBTB17Q13105 803 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 RUNX3Q13761 415 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 AAK1Q2M2I8 961 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 ITPRIPL2Q3MIP1 535 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 CCDC38Q502W7 563 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 TANGO2Q6ICL3 276 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 LRIG3Q6UXM1 1119 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 RANBP10Q6VN20 620 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 NLRP9Q7RTR0 991 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 HDXQ7Z353 690 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 YAF2Q8IY57 180 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 CFAP52Q8N1V2 620 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 CARNMT1Q8N4J0 409 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 GLIS1Q8NBF1 620 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 RIN3Q8TB24 985 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 CCDC110Q8TBZ0 833 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 UCMAQ8WVF2 138 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 IFT81Q8WYA0 676 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 ING5Q8WYH8 240 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 MYEOVQ96EZ4 313 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 FEM1CQ96JP0 617 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 ZNF641Q96N77 438 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 LRRC3BQ96PB8 259 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 MYADMQ96S97 322 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 RBM15Q96T37 977 aaKnown RBP eCLIP6.59□□□□□ -1.352e-9■■■□□ 17.2
CDCA3-205ENST00000535871 CDX2Q99626 313 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 TMEM109Q9BVC6 243 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 CINPQ9BW66 212 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 ROPN1BQ9BZX4 212 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 TRABDQ9H4I3 376 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 ROPN1Q9HAT0 212 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 MRM3Q9HC36 420 aaKnown RBP6.59□□□□□ -1.35
CDCA3-205ENST00000535871 BFARQ9NZS9 450 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 DEC1Q9P2X7 70 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 RSPH14Q9UHP6 348 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 VPS51Q9UID3 782 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 NFU1Q9UMS0 254 aa6.59□□□□□ -1.35
CDCA3-205ENST00000535871 NYNRINQ9P2P1 1898 aaKnown RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 SDR42E2A6NKP2 422 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 NEDD8-MDP1E9PL57 170 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 J3KR12 359 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 CBX4O00257 560 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 SOX1O00570 391 aaPredicted RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 INSIG1O15503 277 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 HRO43593 1189 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 TSPAN3O60637 253 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 PAPSS2O95340 614 aaPredicted RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 POP4O95707 220 aaKnown RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 CD160O95971 181 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 FGF1P05230 155 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 HLA-DQB2P05538 268 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 ZSCAN5DPP0CG00 497 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 HNRNPLP14866 589 aaKnown RBP eCLIP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 FOSL2P15408 326 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 POLR2EP19388 210 aaKnown RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 PSMB4P28070 264 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 ACVRL1P37023 503 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 CSKP41240 450 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 VIPR2P41587 438 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 GRIA2P42262 883 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 SGSHP51688 502 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 SNRPD1P62314 119 aaKnown RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 ARF5P84085 180 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 ECT2LQ008S8 904 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 RAD51Q06609 339 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 SLC10A7Q0GE19 358 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 NAB1Q13506 487 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 ENPP2Q13822 863 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 GAB4Q2WGN9 574 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 FBXO43Q4G163 708 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 FSCBQ5H9T9 825 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 PITRM1Q5JRX3 1037 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 HABP4Q5JVS0 413 aaKnown RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 GRAMD4Q6IC98 578 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 FBXO38Q6PIJ6 1188 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 TPGS1Q6ZTW0 290 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 ADIPOR2Q86V24 386 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 RALGPS2Q86X27 583 aaPredicted RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 CIR1Q86X95 450 aaPredicted RBP6.58□□□□□ -1.36
CDCA3-205ENST00000535871 TP53INP2Q8IXH6 220 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 LMNTD2Q8IXW0 634 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 IQCKQ8N0W5 287 aa6.58□□□□□ -1.36
CDCA3-205ENST00000535871 NDUFAF2Q8N183 169 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms