RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CR2P20023 1033 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 MSNP26038 577 aaKnown RBP12.21□□□□□ -0.45
CHD4-203ENST00000535717 CD6P30203 668 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 OXTRP30559 389 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 ACSL1P33121 698 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 NBL1P41271 181 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 ATP5OP48047 213 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 SCNN1BP51168 640 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 EIF3EP60228 445 aaKnown RBP12.21□□□□□ -0.45
CHD4-203ENST00000535717 GNG11P61952 73 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 AP1S1P61966 158 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 RAD51Q06609 339 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 SFSWAPQ12872 951 aaKnown RBP12.21□□□□□ -0.45
CHD4-203ENST00000535717 SIM2Q14190 667 aaPredicted RBP12.21□□□□□ -0.45
CHD4-203ENST00000535717 NUMA1Q14980 2115 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 HS1BP3Q53T59 392 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 SLC45A4Q5BKX6 768 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 ZNF805Q5CZA5 627 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.21□□□□□ -0.45
CHD4-203ENST00000535717 CEP68Q76N32 757 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 ADAT2Q7Z6V5 191 aaKnown RBP12.21□□□□□ -0.45
CHD4-203ENST00000535717 KBTBD6Q86V97 674 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 CAMK1DQ8IU85 385 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 ABCA7Q8IZY2 2146 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 CNTD1Q8N815 330 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 FAM131CQ96AQ9 280 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 KLHL32Q96NJ5 620 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 NUDCD1Q96RS6 583 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 WDR24Q96S15 920 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 OSBPL1AQ9BXW6 950 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 EPC1Q9H2F5 836 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 SEPT10Q9P0V9 454 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 AMACRQ9UHK6 382 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 FZD4Q9ULV1 537 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 NCKAP1Q9Y2A7 1128 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
CHD4-203ENST00000535717 ARIH1Q9Y4X5 557 aaPredicted RBP12.21□□□□□ -0.45
CHD4-203ENST00000535717 GPR179Q6PRD1 2367 aa12.21□□□□□ -0.46
CHD4-203ENST00000535717 C16orf96A6NNT2 1141 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 CEP104O60308 925 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 NEBLO76041 1014 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 RBP3P10745 1247 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 ITGB7P26010 798 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 PTPN3P26045 913 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 RBL1P28749 1068 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 MAPK8P45983 427 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 DSC2Q02487 901 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 NHLH1Q02575 133 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 ITKQ08881 620 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 WASHC5Q12768 1159 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 IHHQ14623 411 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 GRM3Q14832 879 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 PLK5Q496M5 336 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 PIP5KL1Q5T9C9 394 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 AGBL4Q5VU57 503 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 ALG1LQ6GMV1 187 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 NCEH1Q6PIU2 408 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 SLC36A4Q6YBV0 504 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 PRR23BQ6ZRT6 265 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 ERN2Q76MJ5 926 aaKnown RBP12.2□□□□□ -0.46
CHD4-203ENST00000535717 PARS2Q7L3T8 475 aaKnown RBP12.2□□□□□ -0.46
CHD4-203ENST00000535717 C11orf74Q86VG3 221 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHD4-203ENST00000535717 DEFB119Q8N690 84 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 TTC13Q8NBP0 860 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 HTR3CQ8WXA8 447 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 PPP1R16AQ96I34 528 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 ZC3H10Q96K80 434 aaKnown RBP12.2□□□□□ -0.46
CHD4-203ENST00000535717 SEMA3CQ99985 751 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 GPR174Q9BXC1 333 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 HDAC8Q9BY41 377 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 POLR1EQ9GZS1 481 aaKnown RBP12.2□□□□□ -0.46
CHD4-203ENST00000535717 DUSP15Q9H1R2 295 aaPredicted RBP12.2□□□□□ -0.46
CHD4-203ENST00000535717 ATP13A3Q9H7F0 1226 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 SGK2Q9HBY8 427 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 DYRK4Q9NR20 520 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 TTLL3Q9Y4R7 772 aa12.2□□□□□ -0.46
CHD4-203ENST00000535717 SDK1Q7Z5N4 2213 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SLC7A4O43246 635 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 MTSS1O43312 755 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 NDUFS2O75306 463 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SEMA4FO95754 770 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 FGGP02679 453 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SERPINA4P29622 427 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 ADPRHP54922 357 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 TAS2R38P59533 333 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 RPL6Q02878 288 aaKnown RBP12.19□□□□□ -0.46
CHD4-203ENST00000535717 BCL2L1Q07817 233 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 NIPAL4Q0D2K0 466 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
CHD4-203ENST00000535717 LPAL2Q16609 132 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 TEX44Q53QW1 395 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 RALGPS1Q5JS13 557 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 PMS2CLQ68D20 193 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 DARS2Q6PI48 645 aaKnown RBP12.19□□□□□ -0.46
CHD4-203ENST00000535717 ZSWIM9Q86XI8 627 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms