RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 AGBL4Q5VU57 503 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 PARS2Q7L3T8 475 aaKnown RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 CCDC50Q8IVM0 306 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 MAP7D3Q8IWC1 876 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 RCOR2Q8IZ40 523 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 PGBD3Q8N328 593 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 SLC35F6Q8N357 371 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 OR2AP1Q8NGE2 309 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 ISG20Q96AZ6 181 aaKnown RBP13.29□□□□□ -0.28
CHFR-210ENST00000535527 SMIM14Q96QK8 99 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 OSBPL8Q9BZF1 889 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 ZDHHC6Q9H6R6 413 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 ITM2CQ9NQX7 267 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 SUN2Q9UH99 717 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 GGT7Q9UJ14 662 aa13.29□□□□□ -0.28
CHFR-210ENST00000535527 ZSCAN5CA6NGD5 496 aaPredicted RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 C1QTNF9BB2RNN3 333 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 KCNK1O00180 336 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 ENC1O14682 589 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 IL1BP01584 269 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 C1QTNF9P0C862 333 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 SLC8A1P32418 973 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 PTGER3P43115 390 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 RWDD2BP57060 319 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 RHOAP61586 193 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 PPP2CBP62714 309 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 PPP2CAP67775 309 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 SLC20A2Q08357 652 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 NIPAL4Q0D2K0 466 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 CNTN1Q12860 1018 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 NOMO1Q15155 1222 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 PTPRRQ15256 657 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 INO80DQ53TQ3 878 aaPredicted RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 TMCO4Q5TGY1 634 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 PMS2CLQ68D20 193 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 TEX26Q8N6G2 289 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 OR8D1Q8WZ84 308 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 PRCCQ92733 491 aaPredicted RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 RBM41Q96IZ5 413 aaKnown RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 CALR3Q96L12 384 aaKnown RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 TSGA13Q96PP4 275 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 MGME1Q9BQP7 344 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 GORASP1Q9BQQ3 440 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 ORAI3Q9BRQ5 295 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 NEUROG2Q9H2A3 272 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 EBF2Q9HAK2 575 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 VPS45Q9NRW7 570 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 RXFP3Q9NSD7 469 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 WSB2Q9NYS7 404 aaPredicted RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 HECAQ9UBI9 543 aaPredicted RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 ITM2BQ9Y287 266 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 LRP4O75096 1905 aa13.28□□□□□ -0.28
CHFR-210ENST00000535527 ATXN2Q99700 1313 aaKnown RBP13.28□□□□□ -0.28
CHFR-210ENST00000535527 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 MIF4GDA9UHW6 222 aaKnown RBP13.27□□□□□ -0.29
CHFR-210ENST00000535527 ALOX15BO15296 676 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 ALDH1A2O94788 518 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.29
CHFR-210ENST00000535527 PRKCGP05129 697 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 UGT2B4P06133 528 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 MMP2P08253 660 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
CHFR-210ENST00000535527 DSC2Q02487 901 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 WASHC5Q12768 1159 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 IFI16Q16666 785 aaKnown RBP13.27□□□□□ -0.29
CHFR-210ENST00000535527 PSAPL1Q6NUJ1 521 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 ARMCX6Q7L4S7 300 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 TMEFF1Q8IYR6 380 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 ARRDC2Q8TBH0 407 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 TOE1Q96GM8 510 aaKnown RBP13.27□□□□□ -0.29
CHFR-210ENST00000535527 ZC3H10Q96K80 434 aaKnown RBP13.27□□□□□ -0.29
CHFR-210ENST00000535527 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHFR-210ENST00000535527 PSKH2Q96QS6 385 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 WDR24Q96S15 920 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 IL12RB2Q99665 862 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 BRD8Q9H0E9 1235 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 C6orf106Q9H6K1 298 aaPredicted RBP13.27□□□□□ -0.29
CHFR-210ENST00000535527 IL36AQ9UHA7 158 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 HPCAL4Q9UM19 191 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 WASF3Q9UPY6 502 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 CACNA1EQ15878 2313 aa13.27□□□□□ -0.29
CHFR-210ENST00000535527 KRIT1O00522 736 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 MATN3O15232 486 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 TGM2P21980 687 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 CXCR5P32302 372 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 CD68P34810 354 aaPredicted RBP13.26□□□□□ -0.29
CHFR-210ENST00000535527 NNMTP40261 264 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 ADPRHP54922 357 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 IFI35P80217 286 aaPredicted RBP13.26□□□□□ -0.29
CHFR-210ENST00000535527 SEMG2Q02383 582 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 TRAF2Q12933 501 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 MYLK3Q32MK0 819 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 ALG1LQ6GMV1 187 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 NCEH1Q6PIU2 408 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
CHFR-210ENST00000535527 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms