RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 VAV1P15498 845 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 POLR2EP19388 210 aaKnown RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 GLDCP23378 1020 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 PAX7P23759 505 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 TNFRSF4P43489 277 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 KCNJ1P48048 391 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 NAIF1Q69YI7 327 aaPredicted RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 HEATR6Q6AI08 1181 aaKnown RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 NUDT18Q6ZVK8 323 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 ZNF354CQ86Y25 554 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 UBALD2Q8IYN6 164 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 ALLCQ8N6M5 410 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 GRK7Q8WTQ7 553 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 VAT1Q99536 393 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 IL12RB2Q99665 862 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 ELOVL2Q9NXB9 296 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 WNT16Q9UBV4 365 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 HS3ST2Q9Y278 367 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 ATP8A1Q9Y2Q0 1164 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 TICRRQ7Z2Z1 1910 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 SHISA7A6NL88 538 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 PRRT4C9JH25 899 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 SNX3O60493 162 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 ANP32DO95626 131 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 ATP5BP06576 529 aaKnown RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 PTGIRP43119 386 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 RENBPP51606 427 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 ECT2LQ008S8 904 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 CCDC15Q0P6D6 951 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 WASHC5Q12768 1159 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 CCDC105Q8IYK2 499 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 GJD3Q8N144 294 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 LRRN4Q8WUT4 740 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 STAMBPL1Q96FJ0 436 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 SELENOSQ9BQE4 189 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 TMEM121Q9BTD3 319 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 EPB41L4BQ9H329 900 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 C10orf88Q9H8K7 445 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 SPATS2LQ9NUQ6 558 aaKnown RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 UBA2Q9UBT2 640 aaPredicted RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 CTNNAL1Q9UBT7 734 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 TRHDEQ9UKU6 1024 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 NEU2Q9Y3R4 380 aa12.48□□□□□ -0.41
SCARB1-204ENST00000535005 NYNRINQ9P2P1 1898 aaKnown RBP12.48□□□□□ -0.41
SCARB1-204ENST00000535005 TBC1D3BA6NDS4 549 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 KCNK1O00180 336 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 MAN2B1O00754 1011 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 KCNN4O15554 427 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 GCATO75600 419 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 SRPRAP08240 638 aaKnown RBP12.47□□□□□ -0.41
SCARB1-204ENST00000535005 DLDP09622 509 aaKnown RBP12.47□□□□□ -0.41
SCARB1-204ENST00000535005 CCNB1P14635 433 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 NCALDP61601 193 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 PRKCQQ04759 706 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 KDSRQ06136 332 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 BNIP1Q12981 228 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 TEX44Q53QW1 395 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 IER5LQ5T953 404 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
SCARB1-204ENST00000535005 TRMT10CQ7L0Y3 403 aaKnown RBP12.47□□□□□ -0.41
SCARB1-204ENST00000535005 FAM71DQ8N9W8 422 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 GRAMD1AQ96CP6 724 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 MRGPRX3Q96LB0 322 aa12.47□□□□□ -0.41
SCARB1-204ENST00000535005 RAB3IPQ96QF0 476 aaPredicted RBP12.47□□□□□ -0.41
SCARB1-204ENST00000535005 RNF103O00237 685 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 ATP5HO75947 161 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 STK10O94804 968 aaKnown RBP12.46□□□□□ -0.41
SCARB1-204ENST00000535005 JCHAINP01591 159 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 DRD1P21728 446 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 PTPN3P26045 913 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 CTSOP43234 321 aaPredicted RBP12.46□□□□□ -0.41
SCARB1-204ENST00000535005 SERPINH1P50454 418 aaKnown RBP12.46□□□□□ -0.41
SCARB1-204ENST00000535005 SLC10A7Q0GE19 358 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 LBRQ14739 615 aaKnown RBP12.46□□□□□ -0.41
SCARB1-204ENST00000535005 CYTH1Q15438 398 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 MLF2Q15773 248 aaPredicted RBP12.46□□□□□ -0.41
SCARB1-204ENST00000535005 P3H1Q32P28 736 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 MARC1Q5VT66 337 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 C4orf22Q6V702 233 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 CNTD1Q8N815 330 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 UCMAQ8WVF2 138 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 ISG20Q96AZ6 181 aaKnown RBP12.46□□□□□ -0.41
SCARB1-204ENST00000535005 TEKT5Q96M29 485 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 PSKH2Q96QS6 385 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 SH3GL3Q99963 347 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 CD320Q9NPF0 282 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 ARHGEF3Q9NR81 526 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 SEPT3Q9UH03 358 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 SLC25A13Q9UJS0 675 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 RPL26L1Q9UNX3 145 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms