RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TBC1D23Q9NUY8 699 aa4.48□□□□□ -1.69
ITGB1-219ENST00000534049 SEMA5BQ9P283 1151 aa4.48□□□□□ -1.69
ITGB1-219ENST00000534049 GTF3C4Q9UKN8 822 aa4.48□□□□□ -1.69
ITGB1-219ENST00000534049 PCDHGB6Q9Y5F9 930 aa4.48□□□□□ -1.69
ITGB1-219ENST00000534049 SIRT4Q9Y6E7 314 aaPredicted RBP4.48□□□□□ -1.69
ITGB1-219ENST00000534049 SSH2Q76I76 1423 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 NFAT5O94916 1531 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 PEAK1Q9H792 1746 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 WNK3Q9BYP7 1800 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 SYCE3A1L190 88 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 FAM90A10PA6NDY2 464 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 SRRM3A6NNA2 597 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 KRTAP29-1A8MX34 341 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 MAP2K7O14733 419 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 PQBP1O60828 265 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 OAZ2O95190 189 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 FGFR1OPO95684 399 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 VIMP08670 466 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 IL4RP24394 825 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 PSMA3P25788 255 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 DUSP1P28562 367 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 CA8P35219 290 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 BASP1P80723 227 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 MECOMQ03112 1051 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 POU5F1BQ06416 359 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 KCTD2Q14681 263 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 RASA2Q15283 850 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 GLE1Q53GS7 698 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 AWAT1Q58HT5 328 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 C20orf194Q5TEA3 1177 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 CWC27Q6UX04 472 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 NCCRP1Q6ZVX7 275 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 NEK10Q6ZWH5 1172 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 NANOGNBQ7Z5D8 188 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 UNC5CLQ8IV45 518 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 CCDC146Q8IYE0 955 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 LSMEM2Q8N112 164 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 CLASRPQ8N2M8 674 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 RNF10Q8N5U6 811 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 ARFGAP1Q8N6T3 406 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 SYT2Q8N9I0 419 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 NSMCE1Q8WV22 266 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.47□□□□□ -1.694e-6■■■■□ 21.6
ITGB1-219ENST00000534049 P2RY11Q96G91 374 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 ZFYVE19Q96K21 471 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 C8orf76Q96K31 380 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 SNX27Q96L92 541 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 NACAP1Q9BZK3 213 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 SLC7A5P2Q9GIP4 190 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 ZHX3Q9H4I2 956 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 PARVBQ9HBI1 364 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 POT1Q9NUX5 634 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 ASAP1Q9ULH1 1129 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 CORO2BQ9UQ03 480 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 NOSIPQ9Y314 301 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 SH3GLB1Q9Y371 365 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 MRPL11Q9Y3B7 192 aaKnown RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 FAM169AQ9Y6X4 670 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 KIAA0232Q92628 1395 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 COL5A2P05997 1499 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-219ENST00000534049 USP54Q70EL1 1684 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 RREB1Q92766 1687 aa4.47□□□□□ -1.69
ITGB1-219ENST00000534049 USP6P35125 1406 aa4.46□□□□□ -1.69
ITGB1-219ENST00000534049 RGPD1P0DJD0 1748 aa4.46□□□□□ -1.69
ITGB1-219ENST00000534049 UTRNP46939 3433 aa4.46□□□□□ -1.69
ITGB1-219ENST00000534049 CAMTA1Q9Y6Y1 1673 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CPDO75976 1380 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 LRRD1A4D1F6 860 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TMEM247A6NEH6 219 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 F8W8V4 182 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 NDUFAB1O14561 156 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 KCNQ3O43525 872 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 IDH3BO43837 385 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 MGRN1O60291 552 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 SMIM24O75264 130 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TULP3O75386 442 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 HSPA8P11142 646 aaKnown RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 PRF1P14222 555 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CD9P21926 228 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 GALNSP34059 522 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 ME1P48163 572 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 ACADVLP49748 655 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 FOXG1P55316 489 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 PDE1BQ01064 536 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 DR1Q01658 176 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 ZNF543Q08ER8 600 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 MTAPQ13126 283 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CBX3Q13185 183 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 IFIT5Q13325 482 aaKnown RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TUBB2AQ13885 445 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 GALEQ14376 348 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 SEC23BQ15437 767 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 MAPRE1Q15691 268 aaKnown RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 ALDH1L2Q3SY69 923 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 ZNF260Q3ZCT1 412 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 AASDHQ4L235 1098 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms