RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 MINDY1Q8N5J2 469 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 HCAR2Q8TDS4 363 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 SERAC1Q96JX3 654 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 BAG1Q99933 345 aaPredicted RBP16.05■□□□□ 0.16
TSKU-204ENST00000533752 ETNK2Q9NVF9 386 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 KLHL11Q9NVR0 708 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 DNAAF2Q9NVR5 837 aaKnown RBP16.05■□□□□ 0.16
TSKU-204ENST00000533752 DDX56Q9NY93 547 aaKnown RBP16.05■□□□□ 0.16
TSKU-204ENST00000533752 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
TSKU-204ENST00000533752 LRRD1A4D1F6 860 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 C16orf96A6NNT2 1141 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 RNGTTO60942 597 aaKnown RBP16.04■□□□□ 0.16
TSKU-204ENST00000533752 PCDH8O95206 1070 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 C21orf59P57076 290 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 NSUN2Q08J23 767 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSKU-204ENST00000533752 MMRN1Q13201 1228 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 ZNF235Q14590 738 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 LBRQ14739 615 aaKnown RBP16.04■□□□□ 0.16
TSKU-204ENST00000533752 PAFAH1B3Q15102 231 aaKnown RBP16.04■□□□□ 0.16
TSKU-204ENST00000533752 ATP13A4Q4VNC1 1196 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 CFAP58Q5T655 872 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 NCBP2-AS2Q69YL0 99 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 HORMAD1Q86X24 394 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 PCDH19Q8TAB3 1148 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 EXOC2Q96KP1 924 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 ZNF641Q96N77 438 aaPredicted RBP16.04■□□□□ 0.16
TSKU-204ENST00000533752 SLC6A18Q96N87 628 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 ZNF830Q96NB3 372 aaPredicted RBP16.04■□□□□ 0.16
TSKU-204ENST00000533752 KLHL32Q96NJ5 620 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 PSKH2Q96QS6 385 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 ATP13A3Q9H7F0 1226 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 FSCN3Q9NQT6 498 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 AASDHPPTQ9NRN7 309 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 HAUS2Q9NVX0 235 aa16.04■□□□□ 0.16
TSKU-204ENST00000533752 CNOT1A5YKK6 2376 aaKnown RBP16.04■□□□□ 0.16
TSKU-204ENST00000533752 LAMA1P25391 3075 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 A0A1B0GVT2 93 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 A0A1W2PQU0 124 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 PRAMEF26H0Y7S4 382 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 VILLO15195 856 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 PSTPIP1O43586 416 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 TSPAN6O43657 245 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 MFSD11O43934 449 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 MAFKO60675 156 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 MAGEC1O60732 1142 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 MX2P20592 715 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 KDELR1P24390 212 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 CD38P28907 300 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 SERPINA4P29622 427 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 MAT2AP31153 395 aaKnown RBP16.03■□□□□ 0.16
TSKU-204ENST00000533752 GKP32189 559 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 CSNK1EP49674 416 aaKnown RBP16.03■□□□□ 0.16
TSKU-204ENST00000533752 AP1S1P61966 158 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 RPS21P63220 83 aaKnown RBP16.03■□□□□ 0.16
TSKU-204ENST00000533752 GALNT2Q10471 571 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 OVGP1Q12889 678 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 SLC14A1Q13336 389 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 UAP1L1Q3KQV9 507 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 TIGD7Q6NT04 549 aaPredicted RBP16.03■□□□□ 0.16
TSKU-204ENST00000533752 C11orf63Q6NUN7 778 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 BRAT1Q6PJG6 821 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 ARHGAP36Q6ZRI8 547 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 IQCHQ86VS3 1027 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.03■□□□□ 0.16
TSKU-204ENST00000533752 FEM1CQ96JP0 617 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 ANKRD6Q9Y2G4 727 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 FADS3Q9Y5Q0 445 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 SLCO1B1Q9Y6L6 691 aa16.03■□□□□ 0.16
TSKU-204ENST00000533752 TSPAN11A1L157 253 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 UPK3BL1B0FP48 263 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 UPK3BL2E5RIL1 263 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 RNF103O00237 685 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 NEMP1O14524 444 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 TM4SF5O14894 197 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 DFNA5O60443 496 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 BUB1BO60566 1050 aaPredicted RBP16.02■□□□□ 0.16
TSKU-204ENST00000533752 KRT1P04264 644 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 ZNF883P0CG24 379 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 ZFXP17010 805 aaPredicted RBP16.02■□□□□ 0.16
TSKU-204ENST00000533752 COMTP21964 271 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 XPAP23025 273 aaPredicted RBP16.02■□□□□ 0.16
TSKU-204ENST00000533752 AKT2P31751 481 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 GARSP41250 739 aaKnown RBP16.02■□□□□ 0.16
TSKU-204ENST00000533752 GSDMDP57764 484 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 TMEM259Q4ZIN3 620 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 RALGPS1Q5JS13 557 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 SRLQ86TD4 932 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 SPC24Q8NBT2 197 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 NETO2Q8NC67 525 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 TSEN2Q8NCE0 465 aaKnown RBP16.02■□□□□ 0.16
TSKU-204ENST00000533752 RAPGEF5Q92565 580 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 FATE1Q969F0 183 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 RNF157Q96PX1 679 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 MAK16Q9BXY0 300 aaKnown RBP16.02■□□□□ 0.16
TSKU-204ENST00000533752 SUV39H2Q9H5I1 410 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 EBF2Q9HAK2 575 aa16.02■□□□□ 0.16
TSKU-204ENST00000533752 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.02■□□□□ 0.16
TSKU-204ENST00000533752 DCHS1Q96JQ0 3298 aa16.02■□□□□ 0.15
TSKU-204ENST00000533752 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.01■□□□□ 0.15
TSKU-204ENST00000533752 DCDC2BA2VCK2 349 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms