RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 C2CD4AQ8NCU7 369 aaPredicted RBP28.76■■■□□ 2.19
SAMD1-202ENST00000533683 TMEM169Q96HH4 297 aa28.76■■■□□ 2.19
SAMD1-202ENST00000533683 NMRAL1Q9HBL8 299 aa28.76■■■□□ 2.19
SAMD1-202ENST00000533683 TLK1Q9UKI8 766 aa28.76■■■□□ 2.19
SAMD1-202ENST00000533683 H3BNC9 293 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 PHGDHO43175 533 aaKnown RBP28.75■■■□□ 2.19
SAMD1-202ENST00000533683 STC2O76061 302 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 ALDH1A3P47895 512 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 SIRPB2Q5JXA9 342 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 TSTD2Q5T7W7 516 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 TTC7BQ86TV6 843 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 ALYREFQ86V81 257 aaKnown RBP28.75■■■□□ 2.19
SAMD1-202ENST00000533683 SLC41A1Q8IVJ1 513 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 MFSD6LQ8IWD5 586 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 PLD4Q96BZ4 506 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 C1QTNF1Q9BXJ1 281 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 POLR1EQ9GZS1 481 aaKnown RBP28.75■■■□□ 2.19
SAMD1-202ENST00000533683 RNF38Q9H0F5 515 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 LOC285095A0A1B0GVY8 99 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 G3V2L1 256 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 HOXD9P28356 352 aaPredicted RBP28.75■■■□□ 2.19
SAMD1-202ENST00000533683 GNA12Q03113 381 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 ITGA9Q13797 1035 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 NEPROQ6NW34 567 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 OR7D4Q8NG98 312 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 OR6Y1Q8NGX8 325 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 INPP5DQ92835 1189 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 PRICKLE1Q96MT3 831 aaPredicted RBP28.75■■■□□ 2.19
SAMD1-202ENST00000533683 FAM167BQ9BTA0 163 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 MAGEH1Q9H213 219 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 ANKRD6Q9Y2G4 727 aa28.75■■■□□ 2.19
SAMD1-202ENST00000533683 ATXN1LP0C7T5 689 aaKnown RBP28.74■■■□□ 2.19
SAMD1-202ENST00000533683 SLC35E2BP0CK96 405 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 ARRB2P32121 409 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 CDH4P55283 916 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 PLD1Q13393 1074 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 ZNF235Q14590 738 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 PIWIL2Q8TC59 973 aaKnown RBP28.74■■■□□ 2.19
SAMD1-202ENST00000533683 FBXO5Q9UKT4 447 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 DNAJC16Q9Y2G8 782 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 FCHO1O14526 889 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 CORO1AP31146 461 aaKnown RBP28.74■■■□□ 2.19
SAMD1-202ENST00000533683 AVPR1AP37288 418 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 DEFB103AP81534 67 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 TAF12Q16514 161 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 RABGAP1LQ5R372 815 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 ZNF784Q8NCA9 323 aaPredicted RBP28.74■■■□□ 2.19
SAMD1-202ENST00000533683 UTP4Q969X6 686 aaKnown RBP28.74■■■□□ 2.19
SAMD1-202ENST00000533683 ZNF599Q96NL3 588 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 SORT1Q99523 831 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 NMUR2Q9GZQ4 415 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 WWP1Q9H0M0 922 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 RETREG1Q9H6L5 497 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 RC3H2Q9HBD1 1191 aaKnown RBP28.74■■■□□ 2.19
SAMD1-202ENST00000533683 ARL8BQ9NVJ2 186 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 STK38LQ9Y2H1 464 aa28.74■■■□□ 2.19
SAMD1-202ENST00000533683 FAM95CA0A1B0GW59 222 aa28.73■■■□□ 2.19
SAMD1-202ENST00000533683 C2orf78A6NCI8 922 aa28.73■■■□□ 2.19
SAMD1-202ENST00000533683 OR13J1Q8NGT2 312 aa28.73■■■□□ 2.19
SAMD1-202ENST00000533683 TRMT2BQ96GJ1 504 aaKnown RBP28.73■■■□□ 2.19
SAMD1-202ENST00000533683 ACTL7AQ9Y615 435 aa28.73■■■□□ 2.19
SAMD1-202ENST00000533683 PAPSS2O95340 614 aaPredicted RBP28.72■■■□□ 2.19
SAMD1-202ENST00000533683 POLD2P49005 469 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 RASSF2P50749 326 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 HERC2P3Q9BVR0 1158 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 LNPEPQ9UIQ6 1025 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 ABHD14A-ACY1A0A1B0GW23 586 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 MROH6A6NGR9 719 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 TRAFD1O14545 582 aaPredicted RBP28.72■■■□□ 2.19
SAMD1-202ENST00000533683 RFC2P35250 354 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 CD151P48509 253 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 SGSHP51688 502 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 SLC12A1Q13621 1099 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 SNCBQ16143 134 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 IL31Q6EBC2 164 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 CEP97Q8IW35 865 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 WBP2Q969T9 261 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 BEGAINQ9BUH8 593 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 TASP1Q9H6P5 420 aa28.72■■■□□ 2.19
SAMD1-202ENST00000533683 CPSF2Q9P2I0 782 aaKnown RBP28.72■■■□□ 2.19
SAMD1-202ENST00000533683 LTBP2Q14767 1821 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 AURKAO14965 403 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 CLTBP09497 229 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 ABCE1P61221 599 aaKnown RBP28.71■■■□□ 2.19
SAMD1-202ENST00000533683 RAB33AQ14088 237 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 WDR75Q8IWA0 830 aaKnown RBP28.71■■■□□ 2.19
SAMD1-202ENST00000533683 TMEM151AQ8N4L1 468 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 AUTS2Q8WXX7 1259 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 PTCD3Q96EY7 689 aaKnown RBP28.71■■■□□ 2.19
SAMD1-202ENST00000533683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.71■■■□□ 2.19
SAMD1-202ENST00000533683 CLDN11O75508 207 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 ATP6V1G2O95670 118 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 IRF1P10914 325 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 RAB10P61026 200 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 BTG3Q14201 252 aaPredicted RBP28.71■■■□□ 2.19
SAMD1-202ENST00000533683 ZNF460Q14592 562 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 KIAA0408Q6ZU52 694 aa28.71■■■□□ 2.19
SAMD1-202ENST00000533683 CENPLQ8N0S6 344 aaPredicted RBP28.71■■■□□ 2.19
SAMD1-202ENST00000533683 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.71■■■□□ 2.19
SAMD1-202ENST00000533683 PPP4R1Q8TF05 950 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms