RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SYDE1Q6ZW31 735 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-208ENST00000533643 SYT13Q7L8C5 426 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 JAMLQ86YT9 394 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 TAB3Q8N5C8 712 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-208ENST00000533643 LRRN4CLQ8ND94 238 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 OR8D1Q8WZ84 308 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 OXNAD1Q96HP4 312 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-208ENST00000533643 FCRL5Q96RD9 977 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 RBM15Q96T37 977 aaKnown RBP eCLIP12.06□□□□□ -0.48
COMMD9-208ENST00000533643 MLPHQ9BV36 600 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-208ENST00000533643 CPEB1Q9BZB8 566 aaKnown RBP12.06□□□□□ -0.48
COMMD9-208ENST00000533643 EPHX3Q9H6B9 360 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 ZDHHC6Q9H6R6 413 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 DLGAP2Q9P1A6 1054 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 SARDHQ9UL12 918 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
COMMD9-208ENST00000533643 WASF2Q9Y6W5 498 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.05□□□□□ -0.48
COMMD9-208ENST00000533643 FAM187AA6NFU0 413 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 TNFRSF10AO00220 468 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 ALOX15BO15296 676 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 LEFTY1O75610 366 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 AOC1P19801 751 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 MAPK8P45983 427 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 VPS41P49754 854 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 COPAP53621 1224 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 RAD51Q06609 339 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 GPS1Q13098 491 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 MTAPQ13126 283 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
COMMD9-208ENST00000533643 CRY1Q16526 586 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 ARSIQ5FYB1 569 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 FAXCQ5TGI0 409 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 KDELC1Q6UW63 502 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 C4orf22Q6V702 233 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 MAATS1Q7Z4T9 603 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 CAMK1DQ8IU85 385 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 KLHDC8BQ8IXV7 354 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 SPEM1Q8N4L4 309 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 TMIEQ8NEW7 156 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 OR2T3Q8NH03 318 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 GRIN3AQ8TCU5 1115 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 TUBGCP5Q96RT8 1024 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 TRIM51Q9BSJ1 452 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 LRRC1Q9BTT6 524 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 COL25A1Q9BXS0 654 aaPredicted RBP12.05□□□□□ -0.48
COMMD9-208ENST00000533643 RSPH9Q9H1X1 276 aaPredicted RBP12.05□□□□□ -0.48
COMMD9-208ENST00000533643 ATP13A3Q9H7F0 1226 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 ETNK1Q9HBU6 452 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 RAB6BQ9NRW1 208 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 UBP1Q9NZI7 540 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 IL36AQ9UHA7 158 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 PPM1HQ9ULR3 514 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 PCDHGC4Q9Y5F7 938 aa12.05□□□□□ -0.48
COMMD9-208ENST00000533643 MYO18AQ92614 2054 aaKnown RBP12.05□□□□□ -0.48
COMMD9-208ENST00000533643 MUC3AQ02505 3323 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 ATG2BQ96BY7 2078 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
COMMD9-208ENST00000533643 PIGNO95427 931 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 MT-CYBP00156 380 aaPredicted RBP12.04□□□□□ -0.48
COMMD9-208ENST00000533643 PRNPP04156 253 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 UGT2B4P06133 528 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 SERPINF2P08697 491 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 C7P10643 843 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 IVDP26440 423 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 FDFT1P37268 417 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 MAGEA9P43362 315 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 DGKEP52429 567 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
COMMD9-208ENST00000533643 BCL2L1Q07817 233 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 TRAF2Q12933 501 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 SEMA5AQ13591 1074 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 PRPSAP1Q14558 356 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 GRM3Q14832 879 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 SLC14A2Q15849 920 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 GDPD4Q6W3E5 623 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 MAMSTRQ6ZN01 415 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 DSG4Q86SJ6 1040 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 MMAAQ8IVH4 418 aaKnown RBP12.04□□□□□ -0.48
COMMD9-208ENST00000533643 PIP4K2CQ8TBX8 421 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 PBXIP1Q96AQ6 731 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 LRIG1Q96JA1 1093 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 ZNF641Q96N77 438 aaPredicted RBP12.04□□□□□ -0.48
COMMD9-208ENST00000533643 IER2Q9BTL4 223 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 MKRN2Q9H000 416 aaKnown RBP12.04□□□□□ -0.48
COMMD9-208ENST00000533643 SLC6A17Q9H1V8 727 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 SUV39H2Q9H5I1 410 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 FBRSQ9HAH7 460 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 ASIC3Q9UHC3 531 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 FAM153AQ9UHL3 310 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 RAI2Q9Y5P3 530 aa12.04□□□□□ -0.48
COMMD9-208ENST00000533643 TCRBV21S2A2A0A5A6 115 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 TRAFD1O14545 582 aaPredicted RBP12.03□□□□□ -0.48
COMMD9-208ENST00000533643 HTRA2O43464 458 aaPredicted RBP12.03□□□□□ -0.48
COMMD9-208ENST00000533643 RNASEH1O60930 286 aaKnown RBP12.03□□□□□ -0.48
COMMD9-208ENST00000533643 PMPCBO75439 489 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 ANXA9O76027 345 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 SLC34A2O95436 690 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 PRLP01236 227 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 IL1BP01584 269 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms