RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 GDPD4Q6W3E5 623 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 ERN2Q76MJ5 926 aaKnown RBP12.14□□□□□ -0.47
SSBP3-214ENST00000533209 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
SSBP3-214ENST00000533209 ARMCX6Q7L4S7 300 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 CCNYQ8ND76 341 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 TRIM58Q8NG06 486 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 OR2T34Q8NGX1 318 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 OR14C36Q8NHC7 312 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 NSMCE1Q8WV22 266 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 RUBCNQ92622 972 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 PPP1R16AQ96I34 528 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 KLHL32Q96NJ5 620 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 ALS2CR12Q96Q35 445 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 OSBPL1AQ9BXW6 950 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 DYRK4Q9NR20 520 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 NCDNQ9UBB6 729 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 GMEB2Q9UKD1 530 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 NUMA1Q14980 2115 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 BCLAF3A2AJT9 711 aaKnown RBP12.13□□□□□ -0.47
SSBP3-214ENST00000533209 C16orf96A6NNT2 1141 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 APOC4-APOC2K7ER74 178 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-214ENST00000533209 PIGNO95427 931 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 APOC2P02655 101 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 CCNB1P14635 433 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 ITPKAP23677 461 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 CETN2P41208 172 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 SCNN1BP51168 640 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 NEK3P51956 506 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 MAXP61244 160 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 AP1S1P61966 158 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 IFI35P80217 286 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-214ENST00000533209 GRM3Q14832 879 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 PRKD1Q15139 912 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-214ENST00000533209 B4GALNT4Q76KP1 1039 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
SSBP3-214ENST00000533209 CYP2U1Q7Z449 544 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 CAMK1DQ8IU85 385 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 BBS5Q8N3I7 341 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 DCLK2Q8N568 766 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 P3H4Q92791 437 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 FOXJ1Q92949 421 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 HAUS1Q96CS2 278 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 NUDCD1Q96RS6 583 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 TUBGCP5Q96RT8 1024 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 IL12RB2Q99665 862 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 BRD8Q9H0E9 1235 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 ARRDC1-AS1Q9H2J1 176 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 NT5MQ9NPB1 228 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 RBM22Q9NW64 420 aaKnown RBP eCLIP12.13□□□□□ -0.47
SSBP3-214ENST00000533209 DKK3Q9UBP4 350 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 AMACRQ9UHK6 382 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 PCDHGA5Q9Y5G8 931 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 ZNF292O60281 2723 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 SPAG17Q6Q759 2223 aa12.13□□□□□ -0.47
SSBP3-214ENST00000533209 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 USP34Q70CQ2 3546 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 TSPAN11A1L157 253 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 FAM47DPA6NHR8 397 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 LRRC72A6NJI9 287 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 KCNK1O00180 336 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 SPINT1O43278 529 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ZSCAN12O43309 604 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 FSBPO95073 299 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 JCHAINP01591 159 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 IGHV4-34P06331 123 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ADRB3P13945 408 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 TGM1P22735 817 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 MAOBP27338 520 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 MPLP40238 635 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ABL2P42684 1182 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 MAPK8P45983 427 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 PPP2CBP62714 309 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 PPP2CAP67775 309 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 CREB5Q02930 508 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 CCDC15Q0P6D6 951 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 AP1B1Q10567 949 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 NOMO1Q15155 1222 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 RPS6KA1Q15418 735 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 PLA2G2CQ5R387 149 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 FAM182AQ5T1J6 154 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
SSBP3-214ENST00000533209 KIAA0895LQ68EN5 471 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ALG1LQ6GMV1 187 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ZC3H18Q86VM9 953 aaKnown RBP12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ZSWIM9Q86XI8 627 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 HCAR2Q8TDS4 363 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 PIGKQ92643 395 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 BIRC7Q96CA5 298 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ZNF641Q96N77 438 aaPredicted RBP12.12□□□□□ -0.47
SSBP3-214ENST00000533209 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 SUV39H2Q9H5I1 410 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
SSBP3-214ENST00000533209 TMEM74BQ9NUR3 256 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms