RNA–Protein interactions for RNA: ENST00000533165.1

EML3-218, Transcript of echinoderm microtubule associated protein like 3, human

TSL 3

Gene EML3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EML3-218	ENST00000533165	C9orf64	Q5T6V5	341 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	FAM46C	Q5VWP2	391 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	ZNF776	Q68DI1	518 aa	Predicted RBP	12	□□□□□ -0.49
EML3-218	ENST00000533165	CWF19L1	Q69YN2	538 aa	Known RBP	12	□□□□□ -0.49
EML3-218	ENST00000533165	ALG1L	Q6GMV1	187 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	SYT13	Q7L8C5	426 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	JAML	Q86YT9	394 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	SPEM1	Q8N4L4	309 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	MMGT1	Q8N4V1	131 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	TAB3	Q8N5C8	712 aa	Predicted RBP	12	□□□□□ -0.49
EML3-218	ENST00000533165	OR2T3	Q8NH03	318 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	PBXIP1	Q96AQ6	731 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	IFT43	Q96FT9	208 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	IMP4	Q96G21	291 aa	Known RBP	12	□□□□□ -0.49
EML3-218	ENST00000533165	ZNF419	Q96HQ0	510 aa	Predicted RBP	12	□□□□□ -0.49
EML3-218	ENST00000533165	PPP1R16A	Q96I34	528 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	LRIG1	Q96JA1	1093 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	FCRL5	Q96RD9	977 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	TUBGCP5	Q96RT8	1024 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	RBM15	Q96T37	977 aa	Known RBP eCLIP	12	□□□□□ -0.49
EML3-218	ENST00000533165	FSD1L	Q9BXM9	530 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	OSBPL1A	Q9BXW6	950 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	RAB17	Q9H0T7	212 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	NOD2	Q9HC29	1040 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	DYRK4	Q9NR20	520 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	RAB6B	Q9NRW1	208 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12	□□□□□ -0.49
EML3-218	ENST00000533165	FAM153A	Q9UHL3	310 aa		12	□□□□□ -0.49
EML3-218	ENST00000533165	UTP11	Q9Y3A2	253 aa	Known RBP	12	□□□□□ -0.49
EML3-218	ENST00000533165	TCRBV21S2A2	A0A5A6	115 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	TTC24	A2A3L6	582 aa	Predicted RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	KPNA3	O00505	521 aa	Predicted RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	NDC80	O14777	642 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PSMD3	O43242	534 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	RAD51C	O43502	376 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	SLU7	O95391	586 aa	Known RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	ADH1B	P00325	375 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	DNTT	P04053	509 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	UGT2B4	P06133	528 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	ZSCAN5DP	P0CG00	497 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	CR2	P20023	1033 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	CD68	P34810	354 aa	Predicted RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	RPL22	P35268	128 aa	Known RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	ADCY8	P40145	1251 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PTGIR	P43119	386 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PSMD8	P48556	350 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	CLCN5	P51795	746 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	SFSWAP	Q12872	951 aa	Known RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	MPP3	Q13368	585 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	FZD5	Q13467	585 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	CRY1	Q16526	586 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PCSK7	Q16549	785 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	ARSI	Q5FYB1	569 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	FAM182A	Q5T1J6	154 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	FAXC	Q5TGI0	409 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PKN3	Q6P5Z2	889 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	NCEH1	Q6PIU2	408 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	GDPD4	Q6W3E5	623 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PRUNE1	Q86TP1	453 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PGBD3	Q8N328	593 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	GLIS1	Q8NBF1	620 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	CHST14	Q8NCH0	376 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	TSTD1	Q8NFU3	115 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PIP4K2C	Q8TBX8	421 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	CPEB1	Q9BZB8	566 aa	Known RBP	11.99	□□□□□ -0.49
EML3-218	ENST00000533165	VPS45	Q9NRW7	570 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	UBP1	Q9NZI7	540 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	NCOR1	O75376	2440 aa		11.99	□□□□□ -0.49
EML3-218	ENST00000533165	TECTA	O75443	2155 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165		A0A1W2PQ67	120 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	ERI2	A8K979	691 aa	Known RBP	11.98	□□□□□ -0.49
EML3-218	ENST00000533165	EFCAB8	A8MWE9	144 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	SOCS5	O75159	536 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	PMPCB	O75439	489 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	LEFTY1	O75610	366 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	GJB3	O75712	270 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	PIGN	O95427	931 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	METTL18	O95568	372 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	MT-CYB	P00156	380 aa	Predicted RBP	11.98	□□□□□ -0.49
EML3-218	ENST00000533165	CHRM1	P11229	460 aa	Predicted RBP	11.98	□□□□□ -0.49
EML3-218	ENST00000533165	ACADM	P11310	421 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	COL9A1	P20849	921 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	XPA	P23025	273 aa	Predicted RBP	11.98	□□□□□ -0.49
EML3-218	ENST00000533165	NFKBIA	P25963	317 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	GK	P32189	559 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	CCR3	P51677	355 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	TERF1	P54274	439 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	EPHB1	P54762	984 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	SKOR1	P84550	965 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	NIPAL4	Q0D2K0	466 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	MTAP	Q13126	283 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	SLC14A2	Q15849	920 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	TTC31	Q49AM3	519 aa	Predicted RBP	11.98	□□□□□ -0.49
EML3-218	ENST00000533165	GLE1	Q53GS7	698 aa	Known RBP	11.98	□□□□□ -0.49
EML3-218	ENST00000533165	ARMC12	Q5T9G4	340 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	KIAA1211L	Q6NV74	962 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.98	□□□□□ -0.49
EML3-218	ENST00000533165	PCGF5	Q86SE9	256 aa		11.98	□□□□□ -0.49
EML3-218	ENST00000533165	CACUL1	Q86Y37	369 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms