RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TMCC1O94876 653 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 CSF2P04141 144 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 CKMT1AP12532 417 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 AIF1P55008 147 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 YBEYP58557 167 aaPredicted RBP17.07■□□□□ 0.32
CPSF1-207ENST00000531727 RPL7AP62424 266 aaKnown RBP17.07■□□□□ 0.32
CPSF1-207ENST00000531727 INO80DQ53TQ3 878 aaPredicted RBP17.07■□□□□ 0.32
CPSF1-207ENST00000531727 PPP1R15BQ5SWA1 713 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 GDPD4Q6W3E5 623 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 TMC6Q7Z403 805 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 PARGQ86W56 976 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 ZNF354CQ86Y25 554 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 DCBLD1Q8N8Z6 715 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 DENND6BQ8NEG7 585 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 ARHGEF26Q96DR7 871 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 GDAP1L1Q96MZ0 367 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 CNPY3Q9BT09 278 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 GGT7Q9UJ14 662 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 FZD10Q9ULW2 581 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 TDRD6O60522 2096 aaKnown RBP17.07■□□□□ 0.32
CPSF1-207ENST00000531727 ZFYVE26Q68DK2 2539 aa17.07■□□□□ 0.32
CPSF1-207ENST00000531727 APC2O95996 2303 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 WASH4PA8MWX3 477 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 H3BM21 787 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 AREL1O15033 823 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 CREB3O43889 395 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 IGSF6O95976 241 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 CCDC172P0C7W6 258 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 NME1P15531 152 aaKnown RBP17.06■□□□□ 0.32
CPSF1-207ENST00000531727 FERP16591 822 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 SEMG2Q02383 582 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 RAD51Q06609 339 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 PDE1CQ14123 709 aaPredicted RBP17.06■□□□□ 0.32
CPSF1-207ENST00000531727 ACAD10Q6JQN1 1059 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 MCOLN2Q8IZK6 566 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 FAM181AQ8N9Y4 354 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 BAP1Q92560 729 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 HMCESQ96FZ2 354 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 APOLD1Q96LR9 279 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 DCBLD2Q96PD2 775 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 EPAS1Q99814 870 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 DUSP23Q9BVJ7 150 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 CATSPERBQ9H7T0 1116 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 USP29Q9HBJ7 922 aa17.06■□□□□ 0.32
CPSF1-207ENST00000531727 IPO11Q9UI26 975 aaKnown RBP17.06■□□□□ 0.32
CPSF1-207ENST00000531727 RASA4BC9J798 803 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 GOLGA6L22H0YM25 854 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 K7ESM1 405 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 RASA4O43374 803 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 TLX3O43711 291 aaPredicted RBP17.05■□□□□ 0.32
CPSF1-207ENST00000531727 NEBLO76041 1014 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 MT-CO3P00414 261 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 PFN3P60673 137 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 RHOAP61586 193 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 SERINC3Q13530 473 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 PARP15Q460N3 678 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 CCDC183Q5T5S1 534 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 DCUN1D2Q6PH85 259 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 TTC7BQ86TV6 843 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 UMODL1-AS1Q8N2C9 162 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 AOPEPQ8N6M6 819 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 ZNF548Q8NEK5 533 aaPredicted RBP17.05■□□□□ 0.32
CPSF1-207ENST00000531727 EVA1BQ9NVM1 165 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 DKK3Q9UBP4 350 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 MFHAS1Q9Y4C4 1052 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 CSNK1G3Q9Y6M4 447 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 ACACAQ13085 2346 aa17.05■□□□□ 0.32
CPSF1-207ENST00000531727 CACNA1GO43497 2377 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 LY6G6EA0A0G2JKS1 128 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 FGF10O15520 208 aaPredicted RBP17.04■□□□□ 0.32
CPSF1-207ENST00000531727 OPA1O60313 960 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 GP1BAP07359 652 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 DESP17661 470 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 HTR7P34969 479 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 EIF2S3P41091 472 aaKnown RBP17.04■□□□□ 0.32
CPSF1-207ENST00000531727 ABCG1P45844 678 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 DUSP3P51452 185 aaPredicted RBP17.04■□□□□ 0.32
CPSF1-207ENST00000531727 COL9A2Q14055 689 aaPredicted RBP17.04■□□□□ 0.32
CPSF1-207ENST00000531727 LRRC73Q5JTD7 316 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 TPRG1LQ5T0D9 272 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 ZCCHC8Q6NZY4 707 aaKnown RBP17.04■□□□□ 0.32
CPSF1-207ENST00000531727 KDM7AQ6ZMT4 941 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 IRF2BP2Q7Z5L9 587 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 NETO2Q8NC67 525 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 CENPTQ96BT3 561 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 SYT11Q9BT88 431 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 LHX3Q9UBR4 397 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 KLF15Q9UIH9 416 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 MYO6Q9UM54 1294 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 U3KQA8 63 aa17.04■□□□□ 0.32
CPSF1-207ENST00000531727 AQP9O43315 295 aa17.03■□□□□ 0.32
CPSF1-207ENST00000531727 BRINP1O60477 761 aa17.03■□□□□ 0.32
CPSF1-207ENST00000531727 MMP20O60882 483 aa17.03■□□□□ 0.32
CPSF1-207ENST00000531727 MBD3O95983 291 aa17.03■□□□□ 0.32
CPSF1-207ENST00000531727 MYF5P13349 255 aa17.03■□□□□ 0.32
CPSF1-207ENST00000531727 ATP1A3P13637 1013 aa17.03■□□□□ 0.32
CPSF1-207ENST00000531727 JUNDP17535 347 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms