RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 EXOC3O60645 756 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 FGBP02675 491 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 CHRM5P08912 532 aaPredicted RBP4.66□□□□□ -1.66
USP47-211ENST00000531513 ALDOCP09972 364 aaKnown RBP4.66□□□□□ -1.66
USP47-211ENST00000531513 ZNF8P17098 575 aaPredicted RBP4.66□□□□□ -1.66
USP47-211ENST00000531513 FPR3P25089 353 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 GCH1P30793 250 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 STAT6P42226 847 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 DPP6P42658 865 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 OAZ1P54368 228 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 SHC2P98077 582 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 CFHR3Q02985 330 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 GSTA3Q16772 222 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 MIDNQ504T8 468 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 RNASE12Q5GAN4 147 aaKnown RBP4.66□□□□□ -1.66
USP47-211ENST00000531513 SARM1Q6SZW1 724 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 ADGRF3Q8IZF5 1079 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 TMEM116Q8NCL8 245 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 C11orf65Q8NCR3 313 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 MAFAQ8NHW3 353 aaPredicted RBP4.66□□□□□ -1.66
USP47-211ENST00000531513 COQ8BQ96D53 544 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 KAZALD1Q96I82 304 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 CNDP2Q96KP4 475 aaKnown RBP4.66□□□□□ -1.66
USP47-211ENST00000531513 GPR78Q96P69 363 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 MAP7D2Q96T17 732 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 FAM118BQ9BPY3 351 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 MAK16Q9BXY0 300 aaKnown RBP4.66□□□□□ -1.66
USP47-211ENST00000531513 PDE7BQ9NP56 450 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 HSPB7Q9UBY9 170 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 PKP3Q9Y446 797 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 SPATA31A1Q5TZJ5 1347 aa4.66□□□□□ -1.66
USP47-211ENST00000531513 C17orf113A0A1B0GUU1 675 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 CEP104O60308 925 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 HNRNPCL1O60812 293 aaKnown RBP4.65□□□□□ -1.67
USP47-211ENST00000531513 GALTP07902 379 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 GSTM2P28161 218 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 UBA7P41226 1012 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 ADPRHP54922 357 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 SEMA3AQ14563 771 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 ZNF268Q14587 947 aaPredicted RBP4.65□□□□□ -1.67
USP47-211ENST00000531513 IRF3Q14653 427 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 CNGA3Q16281 694 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 RAB41Q5JT25 222 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 TMEM154Q6P9G4 183 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 SLC46A3Q7Z3Q1 461 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 RNF144BQ7Z419 303 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 VSIG1Q86XK7 387 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 SCML4Q8N228 414 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 CPXM2Q8N436 756 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 KCTD6Q8NC69 237 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 SETD9Q8NE22 299 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 C16orf52Q8NHV5 167 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 NEK9Q8TD19 979 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 HSPH1Q92598 858 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 SMARCE1Q969G3 411 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 FAM149B1Q96BN6 582 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 CIPCQ9C0C6 399 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 OR10A4Q9H209 315 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 SLC32A1Q9H598 525 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 MRGBPQ9NV56 204 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 GAR1Q9NY12 217 aaKnown RBP4.65□□□□□ -1.67
USP47-211ENST00000531513 SUCLA2Q9P2R7 463 aaPredicted RBP4.65□□□□□ -1.67
USP47-211ENST00000531513 ADAM18Q9Y3Q7 739 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 CAPN7Q9Y6W3 813 aa4.65□□□□□ -1.67
USP47-211ENST00000531513 LY6G6EA0A0G2JKS1 128 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 MCIDASD6RGH6 385 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 PRR23D1E9PI22 279 aaPredicted RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 UBE2CO00762 179 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 PRYO14603 147 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 FYB1O15117 783 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 HBP1O60381 514 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 TACC1O75410 805 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 OR2C1O95371 312 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 PRR23D2P0DMB1 279 aaPredicted RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 CD72P21854 359 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 NDUFS1P28331 727 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 FMO4P31512 558 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 TTKP33981 857 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 COPB1P53618 953 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 CDH8P55286 799 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 WDR5P61964 334 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 KRT83P78385 493 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 CYP4A11Q02928 519 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 GOLGA8DPQ0D2H9 430 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 PRPF4BQ13523 1007 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 RBMS2Q15434 407 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 TAF11Q15544 211 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 TMEM266Q2M3C6 531 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 DPCR1Q3MIW9 517 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 FBXO43Q4G163 708 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 BMP2KLQ5H9B9 411 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 TMEM63BQ5T3F8 832 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 HECTD3Q5T447 861 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 AADACL2Q6P093 401 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 SERPINA13PQ6UXR4 307 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 FAM83HQ6ZRV2 1179 aaPredicted RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 CHST9Q7L1S5 443 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 MEPCEQ7L2J0 689 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 BCDIN3DQ7Z5W3 292 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 TADA2BQ86TJ2 420 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms