RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 C16orf97H3BN30 126 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 LINC00271P0C7V0 271 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 KRT5P13647 590 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 LIFRP42702 1097 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 FUT6P51993 359 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 BRWD1-AS2P59051 145 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 LPIN1Q14693 890 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 SAFBQ15424 915 aaKnown RBP eCLIP4.49□□□□□ -1.69
PTPRK-220ENST00000531466 CCDC129Q6ZRS4 1044 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 SFR1Q86XK3 245 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 MB21D2Q8IYB1 491 aaPredicted RBP4.49□□□□□ -1.69
PTPRK-220ENST00000531466 CCDC105Q8IYK2 499 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 GALNT15Q8N3T1 639 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 STYXQ8WUJ0 223 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 FIG4Q92562 907 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 FBRSL1Q9HCM7 1045 aaKnown RBP4.49□□□□□ -1.69
PTPRK-220ENST00000531466 GRHL1Q9NZI5 618 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 ZNF224Q9NZL3 707 aa4.49□□□□□ -1.69
PTPRK-220ENST00000531466 C17orf100A8MU93 164 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 EFCAB8A8MWE9 144 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 STRNO43815 780 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 DHRS4L1P0CG22 281 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 RNF224P0DH78 156 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 HOXC13P31276 330 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 RPS6KA3P51812 740 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 TNFAIP1Q13829 316 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 LONRF1Q17RB8 773 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 GALNTL6Q49A17 601 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 LRRC24Q50LG9 513 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 DCAF6Q58WW2 860 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 SYNE3Q6ZMZ3 975 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 OR4N2Q8NGD1 307 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 RASSF8Q8NHQ8 419 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 TAS1R2Q8TE23 839 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 RSC1A1Q92681 617 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 KIAA1191Q96A73 305 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 C3orf30Q96M34 536 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 LRFN5Q96NI6 719 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 NOX4Q9NPH5 578 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 SIX4Q9UIU6 781 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 VDAC3Q9Y277 283 aa4.48□□□□□ -1.69
PTPRK-220ENST00000531466 TP53BP1Q12888 1972 aaPredicted RBP4.47□□□□□ -1.69
PTPRK-220ENST00000531466 A0A0G2JPF8 293 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 HNRNPCL3B7ZW38 293 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 EXTL3O43909 919 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 HNRNPCL1O60812 293 aaKnown RBP4.47□□□□□ -1.69
PTPRK-220ENST00000531466 GAGE7O76087 117 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 TNFRSF6BO95407 300 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 BAG4O95429 457 aaKnown RBP4.47□□□□□ -1.69
PTPRK-220ENST00000531466 TFRCP02786 760 aaKnown RBP4.47□□□□□ -1.69
PTPRK-220ENST00000531466 CYP21A2P08686 494 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 GAGE12FP0CL80 117 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 GAGE12GP0CL81 117 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 GAGE12IP0CL82 117 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 HNRNPCL4P0DMR1 293 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 MYF6P23409 242 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 GAGE1Q13065 139 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 GAGE4Q13068 117 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 ATPAF1Q5TC12 328 aaPredicted RBP4.47□□□□□ -1.69
PTPRK-220ENST00000531466 SLC9B2Q86UD5 537 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 SARGQ9BW04 601 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 RBM4Q9BWF3 364 aaKnown RBP4.47□□□□□ -1.69
PTPRK-220ENST00000531466 NLKQ9UBE8 527 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 SLC9A2Q9UBY0 812 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 KCNS2Q9ULS6 477 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 DAPP1Q9UN19 280 aa4.47□□□□□ -1.69
PTPRK-220ENST00000531466 MORC2Q9Y6X9 1032 aaPredicted RBP4.47□□□□□ -1.69
PTPRK-220ENST00000531466 FAM157AC9JC47 383 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 CDK7P50613 346 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 NR0B1P51843 470 aaKnown RBP4.46□□□□□ -1.7
PTPRK-220ENST00000531466 PMP22Q01453 160 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 RPS6KA2Q15349 733 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 SYT16Q17RD7 645 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 NFRKBQ6P4R8 1299 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 SATL1Q86VE3 508 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 LNX1Q8TBB1 728 aaPredicted RBP4.46□□□□□ -1.7
PTPRK-220ENST00000531466 ARRDC2Q8TBH0 407 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 GRAPLQ8TC17 118 aaPredicted RBP4.46□□□□□ -1.7
PTPRK-220ENST00000531466 UBE2Q2Q8WVN8 375 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 SLCO3A1Q9UIG8 710 aa4.46□□□□□ -1.7
PTPRK-220ENST00000531466 CPED1A4D0V7 1026 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 ZNF587BE7ETH6 402 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 HNRNPRO43390 633 aaKnown RBP4.45□□□□□ -1.7
PTPRK-220ENST00000531466 IL1AP01583 271 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 ALDH4A1P30038 563 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 TM4SF4P48230 202 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 NOVP48745 357 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 ZNF155Q12901 538 aaPredicted RBP4.45□□□□□ -1.7
PTPRK-220ENST00000531466 SLC1A5Q15758 541 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 MON1AQ86VX9 555 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 MCPH1Q8NEM0 835 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 TANKQ92844 425 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 RTKNQ9BST9 563 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 BARHL1Q9BZE3 327 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 ELAC1Q9H777 363 aaKnown RBP4.45□□□□□ -1.7
PTPRK-220ENST00000531466 TAAR2Q9P1P5 351 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 BAG5Q9UL15 447 aa4.45□□□□□ -1.7
PTPRK-220ENST00000531466 OR6C68A6NDL8 312 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 SLC25A17O43808 307 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 ARSAP15289 507 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms