RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ARHGAP28Q9P2N2 729 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TMEM191CA6NGB0 347 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 PI4K2BG5E9Z4 385 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 STX16-NPEPL1H3BU86 382 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TLR3O15455 904 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 NDUFA2O43678 99 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TMEM191BP0C7N4 346 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 BDNFP23560 247 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TM4SF1P30408 202 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 SREBF1P36956 1147 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 BNIP2Q12982 314 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 BMPR2Q13873 1038 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 SNAP47Q5SQN1 464 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TXNRD3NBQ6F5E7 133 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 PMF1Q6P1K2 205 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 C15orf52Q6ZUT6 534 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 OTOP1Q7RTM1 612 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 PIWIL3Q7Z3Z3 882 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 LIX1LQ8IVB5 337 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 THNSL1Q8IYQ7 743 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 SVOPQ8N4V2 548 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 BPIFB6Q8NFQ5 453 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ZSCAN18Q8TBC5 510 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ACTL9Q8TC94 416 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CENPNQ96H22 339 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 NT5C1BQ96P26 610 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CPXM1Q96SM3 734 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 UQCC2Q9BRT2 126 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 FTHL17Q9BXU8 183 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TMEM181Q9P2C4 612 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ZC3H7BQ9UGR2 993 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ATPIF1Q9UII2 106 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CFL2Q9Y281 166 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 NOSIPQ9Y314 301 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CAB39Q9Y376 341 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 PMF1-BGLAPU3KQ54 211 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF638Q14966 1978 aaKnown RBP8.21□□□□□ -1.09
CSDE1-214ENST00000530886 SLCO1B7G3V0H7 640 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 RIMBP2O15034 1052 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 RAD51BO15315 384 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 CFLARO15519 480 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 KCNA4P22459 653 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 CCNCP24863 283 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 ACVR2AP27037 513 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 HTR1BP28222 390 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 HSPA1LP34931 641 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 DSTNP60981 165 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 GHRHRQ02643 423 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 AP3B2Q13367 1082 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 LAMC2Q13753 1193 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 FAM205BPQ63HN1 556 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 FAM45BPQ6NSW5 357 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 GALNT7Q86SF2 657 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 FAM178BQ8IXR5 827 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF781Q8N8C0 355 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 GALNT6Q8NCL4 622 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 MCUQ8NE86 351 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 FAM45AQ8TCE6 357 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 DYNC2LI1Q8TCX1 351 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 RTP4Q96DX8 246 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 FBXL20Q96IG2 436 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 CDHR1Q96JP9 859 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 DEPDC7Q96QD5 511 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 TMEM246Q9BRR3 403 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 TMEM8AQ9HCN3 771 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 VTI1BQ9UEU0 232 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 PCDHGB1Q9Y5G3 927 aa8.21□□□□□ -1.09
CSDE1-214ENST00000530886 COL16A1Q07092 1604 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-214ENST00000530886 SLC9A3R1O14745 358 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-214ENST00000530886 PDPK1O15530 556 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 KCNJ13O60928 360 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 PSMD10O75832 226 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 DDHD2O94830 711 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 FCGR1AP12314 374 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 MX2P20592 715 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 MAGEA12P43365 314 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 RACK1P63244 317 aaKnown RBP8.21□□□□□ -1.1
CSDE1-214ENST00000530886 NOMO3P69849 1222 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 SPATS1Q496A3 300 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 ZBTB46Q86UZ6 589 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 SNX29P2Q8IUI4 249 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 WDR49Q8IV35 697 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 GALNT12Q8IXK2 581 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 OR10Z1Q8NGY1 313 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 LHFPL5Q8TAF8 219 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 CYP2W1Q8TAV3 490 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 SLC10A4Q96EP9 437 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 CHID1Q9BWS9 393 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 UPF3AQ9H1J1 476 aaKnown RBP8.21□□□□□ -1.1
CSDE1-214ENST00000530886 FBXO5Q9UKT4 447 aa8.21□□□□□ -1.1
CSDE1-214ENST00000530886 TRPC5Q9UL62 973 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-214ENST00000530886 A0A0G2JMP0 313 aa8.2□□□□□ -1.1
CSDE1-214ENST00000530886 CENPXA8MT69 81 aa8.2□□□□□ -1.1
CSDE1-214ENST00000530886 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
CSDE1-214ENST00000530886 HDAC3O15379 428 aa8.2□□□□□ -1.1
CSDE1-214ENST00000530886 SNX2O60749 519 aa8.2□□□□□ -1.1
CSDE1-214ENST00000530886 TIPRLO75663 272 aa8.2□□□□□ -1.1
CSDE1-214ENST00000530886 ALDOAP04075 364 aaKnown RBP8.2□□□□□ -1.1
CSDE1-214ENST00000530886 FOSL1P15407 271 aa8.2□□□□□ -1.1
CSDE1-214ENST00000530886 CRHBPP24387 322 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms