RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TMEM245Q9H330 911 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 KDM4CQ9H3R0 1056 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 GEMIN8Q9NWZ8 242 aaKnown RBP8.69□□□□□ -1.02
SSBP3-212ENST00000528930 ARHGEF38Q9NXL2 777 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 SLC12A6Q9UHW9 1150 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 STAP1Q9ULZ2 295 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 MYO6Q9UM54 1294 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 DYRK1BQ9Y463 629 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 HS3ST4Q9Y661 456 aa8.69□□□□□ -1.02
SSBP3-212ENST00000528930 CSMD2Q7Z408 3487 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 A0A1W2PQC6 194 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 TCRBV5S1A1TA0A578 114 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 TYW5A2RUC4 315 aaKnown RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 F5H5T6 163 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 H0Y8X5 98 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 GOLGA8SH3BPF8 625 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF500O60304 480 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 PAGE1O75459 146 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 AGFG2O95081 481 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 DLDP09622 509 aaKnown RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 FURINP09958 794 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 FERP16591 822 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 COL8A1P27658 744 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 IRAK1P51617 712 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 GSCP56915 257 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 CLN3Q13286 438 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 CAMK2GQ13555 558 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 AUHQ13825 339 aaKnown RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 STARD3Q14849 445 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 E2F5Q15329 346 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 ZSCAN23Q3MJ62 389 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 RAB6CQ53S08 254 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 BRMS1LQ5PSV4 323 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 E4F1Q66K89 784 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 SERPINA13PQ6UXR4 307 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 KANSL1Q7Z3B3 1105 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 PHLDB2Q86SQ0 1253 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 CIR1Q86X95 450 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 PHF13Q86YI8 300 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 TMPRSS6Q8IU80 811 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF683Q8IZ20 524 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 CCAR2Q8N163 923 aaKnown RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 EMC1Q8N766 993 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF366Q8N895 744 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 MSANTD4Q8NCY6 345 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 JOSD2Q8TAC2 188 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 RNF34Q969K3 372 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 MIB2Q96AX9 1013 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 CCDC97Q96F63 343 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 MRGPRX3Q96LB0 322 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 CFAP57Q96MR6 1250 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 C11orf70Q9BRQ4 267 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 TKTL2Q9H0I9 626 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 RAB6CQ9H0N0 254 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 MIR1-1HGQ9H1L0 117 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 WDCPQ9H6R7 721 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 POLR1BQ9H9Y6 1135 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 METTL5Q9NRN9 209 aaKnown RBP8.68□□□□□ -1.02
SSBP3-212ENST00000528930 DKK3Q9UBP4 350 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 ANAPC2Q9UJX6 822 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 PLA2G4CQ9UP65 541 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 PLAAQ9Y263 795 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 ESPL1Q14674 2120 aa8.68□□□□□ -1.02
SSBP3-212ENST00000528930 A0A1B0GVM2 712 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 A1L4Q6 167 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 TCAF2A6NFQ2 919 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 C2CD4BA6NLJ0 364 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 LRRC53A6NM62 1247 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 DRGXA6NNA5 263 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 METTL12A8MUP2 240 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 OIP5O43482 229 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 GJB6O95452 261 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 F9P00740 461 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 ATP5BP06576 529 aaKnown RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 EPHX1P07099 455 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 HOXB4P17483 251 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 POLR2EP19388 210 aaKnown RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 MZF1P28698 734 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 CD6P30203 668 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 PBX1P40424 430 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 CSKP41240 450 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 NSFP46459 744 aaKnown RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 CSNK1EP49674 416 aaKnown RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 AFF3P51826 1226 aaKnown RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 PLK1P53350 603 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 FANCCQ00597 558 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 DEUP1Q05D60 604 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 MTA1Q13330 715 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 CDH18Q13634 790 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 CCDC14Q49A88 953 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 FILIP1LQ4L180 1135 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 PITRM1Q5JRX3 1037 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 TTC39BQ5VTQ0 682 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 DCAF12L1Q5VU92 463 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 CXorf57Q6NSI4 855 aaKnown RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 KDM7AQ6ZMT4 941 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 MON1BQ7L1V2 547 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 MAMDC2Q7Z304 686 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 APCDD1Q8J025 514 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 OR52K2Q8NGK3 314 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms