RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 UEVLDQ8IX04 471 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 GALNT15Q8N3T1 639 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 DCLK2Q8N568 766 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 MYCT1Q8N699 235 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 NANOGP1Q8N7R0 232 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 LSMEM1Q8N8F7 131 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 NRACQ8N912 160 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 CCDC148Q8NFR7 591 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 FBXO30Q8TB52 745 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 STYXQ8WUJ0 223 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 HMGB4Q8WW32 186 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 GLMPQ8WWB7 406 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 ATP2A3Q93084 1043 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 C3orf49Q96BT1 292 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 C18orf8Q96DM3 657 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 NRBF2Q96F24 287 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 CEP295NLQ96MC4 621 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 SH3GL3Q99963 347 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 PAAF1Q9BRP4 392 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 EDEM3Q9BZQ6 932 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 LMAN2LQ9H0V9 348 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 OSBPL5Q9H0X9 879 aaPredicted RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 CCDC134Q9H6E4 229 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 EPS8L2Q9H6S3 715 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 ERVK-5Q9HDB9 667 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 PSD3Q9NYI0 1048 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 NFKBIL1Q9UBC1 381 aaPredicted RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 PI4KBQ9UBF8 816 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 RASAL2Q9UJF2 1139 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 MOSPD1Q9UJG1 213 aa3.34□□□□□ -1.87
COPB1-205ENST00000526527 NOSIPQ9Y314 301 aaKnown RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 SIRT4Q9Y6E7 314 aaPredicted RBP3.34□□□□□ -1.87
COPB1-205ENST00000526527 MTUS2Q5JR59 1369 aa3.34□□□□□ -1.88
COPB1-205ENST00000526527 CFAP65Q6ZU64 1925 aaKnown RBP3.34□□□□□ -1.88
COPB1-205ENST00000526527 NCOA2Q15596 1464 aa3.34□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3DA0A087WVF3 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3IA0A087WXS9 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3EA0A087X179 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3KA0A087X1G2 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 GXYLT2A0PJZ3 443 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3BA6NDS4 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3FA6NER0 549 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 HMX3A6NHT5 357 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 MYMKA6NI61 221 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 MBD3L5A6NJ08 208 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3LB9A6J9 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SGK1O00141 431 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 PLOD2O00469 737 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 CETN3O15182 167 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SEPT4O43236 478 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 CTIFO43310 598 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 ZBTB14O43829 449 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SNX4O95219 450 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 PDE8BO95263 885 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SLC4A1P02730 911 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 S100A6P06703 90 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3HP0C7X1 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ARF4P18085 180 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 SERPINA4P29622 427 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ATP5DP30049 168 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 MCM5P33992 734 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 GRK5P34947 590 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 NF2P35240 595 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 THBS4P35443 961 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 STAT1P42224 750 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 CTCFP49711 727 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 CDK7P50613 346 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 PSMD7P51665 324 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 RRP1P56182 461 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 POLR2FP61218 127 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 WDR5P61964 334 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 SF3A3Q12874 501 aaKnown RBP eCLIP3.33□□□□□ -1.88
COPB1-205ENST00000526527 MTAPQ13126 283 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 C15orf59Q2T9L4 293 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 RABL6Q3YEC7 729 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 RNASE12Q5GAN4 147 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 FAM90A2PQ658T7 463 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ANKRD40Q6AI12 368 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3GQ6DHY5 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 GPR139Q6DWJ6 353 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3CQ6IPX1 549 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 NAA16Q6N069 864 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 BCDIN3DQ7Z5W3 292 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 GALNT5Q7Z7M9 940 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 GALNT13Q8IUC8 556 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D3Q8IZP1 549 aaPredicted RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 LINC01465Q8N7H1 131 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 GOLGA5Q8TBA6 731 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 ACMSDQ8TDX5 336 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 NOC3LQ8WTT2 800 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 THAP4Q8WY91 577 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 AKAP1Q92667 903 aaKnown RBP eCLIP3.33□□□□□ -1.88
COPB1-205ENST00000526527 CUL5Q93034 780 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 CTHRC1Q96CG8 243 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 COG8Q96MW5 612 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 JAKMIP1Q96N16 626 aaKnown RBP3.33□□□□□ -1.88
COPB1-205ENST00000526527 FAM118BQ9BPY3 351 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SDF4Q9BRK5 362 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 SPZ1Q9BXG8 430 aa3.33□□□□□ -1.88
COPB1-205ENST00000526527 CAPS2Q9BXY5 557 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms