RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 VAC14Q08AM6 782 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 C15orf59Q2T9L4 293 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 TAF1BQ53T94 588 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 ATXN7L2Q5T6C5 722 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 FAM102AQ5T9C2 384 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 TAF3Q5VWG9 929 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 INO80CQ6PI98 192 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 ZNF783Q6ZMS7 281 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 CLEC14AQ86T13 490 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 DCP2Q8IU60 420 aaKnown RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 SFTPA2Q8IWL1 248 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 LSMEM2Q8N112 164 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 EXD3Q8N9H8 876 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 TP53I13Q8NBR0 393 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 JOSD2Q8TAC2 188 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 ASB12Q8WXK4 309 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 ARHGEF2Q92974 986 aaKnown RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 FEM1CQ96JP0 617 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 HAPLN3Q96S86 360 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 ZYG11BQ9C0D3 744 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 DYRK4Q9NR20 520 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 RRN3Q9NYV6 651 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 HOOK1Q9UJC3 728 aaKnown RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 SALL4Q9UJQ4 1053 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 FARP1Q9Y4F1 1045 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 PCDHGA8Q9Y5G5 932 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 RELNP78509 3460 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 NEMP2A6NFY4 417 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 GOLGA8SH3BPF8 625 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 TPP1O14773 563 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 MUSKO15146 869 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 ALPPL2P10696 532 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 KRT9P35527 623 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 DNA2P51530 1060 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 NOMO3P69849 1222 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 MTA1Q13330 715 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 LINC00303Q3SY05 128 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 ZDHHC17Q8IUH5 632 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 PHACTR4Q8IZ21 702 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 DENND6BQ8NEG7 585 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 C18orf8Q96DM3 657 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 CCDC114Q96M63 670 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 DPH1Q9BZG8 443 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 PPARGC1AQ9UBK2 798 aaKnown RBP14.49□□□□□ -0.09
CPSF1-201ENST00000526271 STAP1Q9ULZ2 295 aa14.49□□□□□ -0.09
CPSF1-201ENST00000526271 A0A1W2PQM1 296 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 LMO7DNF2Z398 122 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 YY2O15391 372 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 INSIG1O15503 277 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 MMP20O60882 483 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 F9P00740 461 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 UGT2B4P06133 528 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 MMEP08473 750 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 TSHRP16473 764 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 CHRNB2P17787 502 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 DUSP3P51452 185 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-201ENST00000526271 ADKP55263 362 aaKnown RBP14.48□□□□□ -0.09
CPSF1-201ENST00000526271 NRG1Q02297 640 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-201ENST00000526271 SLC20A2Q08357 652 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 TGIF1Q15583 401 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 CCDC14Q49A88 953 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 ZNF805Q5CZA5 627 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 PRRT3Q5FWE3 981 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 C6orf132Q5T0Z8 1188 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 RETSATQ6NUM9 610 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 RBM44Q6ZP01 1051 aaKnown RBP14.48□□□□□ -0.09
CPSF1-201ENST00000526271 PHLDB2Q86SQ0 1253 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 VPS36Q86VN1 386 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 CREBRFQ8IUR6 639 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 PLPP6Q8IY26 295 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 CCDC185Q8N715 623 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 FAM174AQ8TBP5 190 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 SLC20A1Q8WUM9 679 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 CPA5Q8WXQ8 436 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 ISG20Q96AZ6 181 aaKnown RBP14.48□□□□□ -0.09
CPSF1-201ENST00000526271 PPP1R16AQ96I34 528 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 FAM81BQ96LP2 452 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 KLHL32Q96NJ5 620 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 ABCG4Q9H172 646 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 SYNCQ9H7C4 482 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 THSD1Q9NS62 852 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 KIAA1468Q9P260 1216 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 DNAI1Q9UI46 699 aa14.48□□□□□ -0.09
CPSF1-201ENST00000526271 NOCTQ9UK39 431 aaKnown RBP14.48□□□□□ -0.09
CPSF1-201ENST00000526271 SPENQ96T58 3664 aaKnown RBP14.47□□□□□ -0.09
CPSF1-201ENST00000526271 B8ZZF3 427 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 FPGTO14772 594 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 TSPAN6O43657 245 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 LRIG2O94898 1065 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 C6P13671 934 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 HGFP14210 728 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 TIMP2P16035 220 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 WT1P19544 449 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-201ENST00000526271 ADRA1BP35368 520 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 RECQLP46063 649 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-201ENST00000526271 UCNP55089 124 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 ATP11AP98196 1134 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 PTP4A2Q12974 167 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 NR0B2Q15466 257 aa14.47□□□□□ -0.09
CPSF1-201ENST00000526271 TCEA2Q15560 299 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms