RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 LARP4BQ92615 738 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 REPS1Q96D71 796 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 RBM18Q96H35 190 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 HS6ST2Q96MM7 605 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 FYTTD1Q96QD9 318 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 EYA3Q99504 573 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 PRRX2Q99811 253 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 MACROD1Q9BQ69 325 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 TLR8Q9NR97 1041 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 SLC25A10Q9UBX3 287 aaPredicted RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 KLQ9UEF7 1012 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 ZFP37Q9Y6Q3 630 aaPredicted RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 PIK3C2GO75747 1445 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 PRAG1Q86YV5 1406 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 NCOA3Q9Y6Q9 1424 aa5.02□□□□□ -1.61
CD44-220ENST00000525688 SETD1AO15047 1707 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 XRN1Q8IZH2 1706 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 DHX57Q6P158 1386 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 XIRP1Q702N8 1843 aaKnown RBP5.02□□□□□ -1.61
CD44-220ENST00000525688 MYOM2P54296 1465 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 PASKQ96RG2 1323 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 TMEM191CA6NGB0 347 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 GAGE10A6NGK3 116 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 C16orf96A6NNT2 1141 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 H0Y626 953 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 SPTLC2O15270 562 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 TOM1O60784 492 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 TBCAO75347 108 aaKnown RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 JTBO76095 146 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 CNTN5O94779 1100 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 ENO1P06733 434 aaKnown RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 CLTBP09497 229 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 RFPL3SP0C7P2 107 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 SCG2P13521 617 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 RPS2P15880 293 aaKnown RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 PORP16435 677 aaPredicted RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 HOXB9P17482 250 aaPredicted RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 ATP5F1P24539 256 aaPredicted RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 TRPC1P48995 793 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 POLD2P49005 469 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 ADPRHP54922 357 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 RPP30P78346 268 aaKnown RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 IFI35P80217 286 aaPredicted RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 B4GALNT1Q00973 533 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 CALD1Q05682 793 aaKnown RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 GOLGA8FQ08AF8 430 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 LRRC74AQ0VAA2 488 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 AP1B1Q10567 949 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 SEMA3AQ14563 771 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 NFIL3Q16649 462 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 MMEL1Q495T6 779 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 HSP90B2PQ58FF3 399 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 C16orf87Q6PH81 154 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 TMEM65Q6PI78 240 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 H1FNTQ75WM6 255 aaPredicted RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 CCDC91Q7Z6B0 441 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 GALNT7Q86SF2 657 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 SLC9B2Q86UD5 537 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 SCN4BQ8IWT1 228 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 ZNF619Q8N2I2 560 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 ZNF366Q8N895 744 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 GSDMBQ8TAX9 411 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 GIMAP1Q8WWP7 306 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 RNFT2Q96EX2 444 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 CNDP2Q96KP4 475 aaKnown RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 CCDC17Q96LX7 622 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 GPR78Q96P69 363 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 YME1L1Q96TA2 773 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 CD180Q99467 661 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 GATA5Q9BWX5 397 aaPredicted RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 HDHD5Q9BXW7 423 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 EDEM3Q9BZQ6 932 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 SIL1Q9H173 461 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 BEX4Q9NWD9 120 aaPredicted RBP5.01□□□□□ -1.61
CD44-220ENST00000525688 ASNSD1Q9NWL6 643 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 HPF1Q9NWY4 346 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 HCN3Q9P1Z3 774 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 PCDHGB5Q9Y5G0 923 aa5.01□□□□□ -1.61
CD44-220ENST00000525688 FLT1P17948 1338 aa5□□□□□ -1.61
CD44-220ENST00000525688 PTCH1Q13635 1447 aa5□□□□□ -1.61
CD44-220ENST00000525688 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5□□□□□ -1.61
CD44-220ENST00000525688 ERICH4A6NGS2 130 aa5□□□□□ -1.61
CD44-220ENST00000525688 MCIDASD6RGH6 385 aa5□□□□□ -1.61
CD44-220ENST00000525688 DSCR3O14972 297 aa5□□□□□ -1.61
CD44-220ENST00000525688 PTP4A3O75365 173 aa5□□□□□ -1.61
CD44-220ENST00000525688 TPPPO94811 219 aa5□□□□□ -1.61
CD44-220ENST00000525688 GUCA1CO95843 209 aa5□□□□□ -1.61
CD44-220ENST00000525688 ALDOCP09972 364 aaKnown RBP5□□□□□ -1.61
CD44-220ENST00000525688 LYL1P12980 280 aa5□□□□□ -1.61
CD44-220ENST00000525688 CYP4B1P13584 511 aa5□□□□□ -1.61
CD44-220ENST00000525688 PKMP14618 531 aaKnown RBP5□□□□□ -1.61
CD44-220ENST00000525688 KRT4P19013 534 aa5□□□□□ -1.61
CD44-220ENST00000525688 TGM2P21980 687 aa5□□□□□ -1.61
CD44-220ENST00000525688 PRKCHP24723 683 aa5□□□□□ -1.61
CD44-220ENST00000525688 CACNA2D1P54289 1103 aa5□□□□□ -1.61
CD44-220ENST00000525688 SLC12A2P55011 1212 aa5□□□□□ -1.61
CD44-220ENST00000525688 ARF3P61204 181 aaPredicted RBP5□□□□□ -1.61
CD44-220ENST00000525688 ARF1P84077 181 aaKnown RBP5□□□□□ -1.61
CD44-220ENST00000525688 SHC2P98077 582 aa5□□□□□ -1.61
CD44-220ENST00000525688 PTP4A2Q12974 167 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms