RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 MINDY3Q9H8M7 445 aa17.22■□□□□ 0.35
BEST1-203ENST00000524877 SKAP2O75563 359 aaPredicted RBP17.21■□□□□ 0.35
BEST1-203ENST00000524877 PCCBP05166 539 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 EIF2B2P49770 351 aaKnown RBP17.21■□□□□ 0.35
BEST1-203ENST00000524877 CDK16Q00536 496 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 SLC26A9Q7LBE3 791 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 CYP4F12Q9HCS2 524 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 MIEF1Q9NQG6 463 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 PIH1D1Q9NWS0 290 aaKnown RBP17.21■□□□□ 0.35
BEST1-203ENST00000524877 CCNDBP1O95273 360 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 RFX3P48380 749 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 GALNTL6Q49A17 601 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 CYP20A1Q6UW02 462 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 VITQ6UXI7 678 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 OR6K2Q8NGY2 324 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 RBBP8Q99708 897 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 TMCO1Q9UM00 188 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 STBD1O95210 358 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 HNRNPA1P09651 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
BEST1-203ENST00000524877 OCM2P0CE71 109 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 OCMP0CE72 109 aaPredicted RBP17.21■□□□□ 0.35
BEST1-203ENST00000524877 HLA-DPA1P20036 260 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 DAOAP59103 153 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 UBE3AQ05086 875 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 SOWAHAQ2M3V2 549 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 TAC4Q86UU9 113 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 FBXO39Q8N4B4 442 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 TUBGCP3Q96CW5 907 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 CPXM1Q96SM3 734 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 ACOX2Q99424 681 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 KCTD5Q9NXV2 234 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 IRAK2O43187 625 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 UGT2B4P06133 528 aa17.21■□□□□ 0.35
BEST1-203ENST00000524877 DHPSP49366 369 aaPredicted RBP17.21■□□□□ 0.35
BEST1-203ENST00000524877 NSUN3Q9H649 340 aaKnown RBP17.21■□□□□ 0.35
BEST1-203ENST00000524877 INPP4BO15327 924 aa17.21■□□□□ 0.34
BEST1-203ENST00000524877 KATNA1O75449 491 aa17.21■□□□□ 0.34
BEST1-203ENST00000524877 MAXP61244 160 aa17.21■□□□□ 0.34
BEST1-203ENST00000524877 TEAD2Q15562 447 aa17.21■□□□□ 0.34
BEST1-203ENST00000524877 RERGQ96A58 199 aaPredicted RBP17.21■□□□□ 0.34
BEST1-203ENST00000524877 PRDM12Q9H4Q4 367 aa17.21■□□□□ 0.34
BEST1-203ENST00000524877 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.34
BEST1-203ENST00000524877 ELK3P41970 407 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 ARPC4P59998 168 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 IL2P60568 153 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 GNA12Q03113 381 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 MED21Q13503 144 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 COL9A3Q14050 684 aaPredicted RBP17.2■□□□□ 0.34
BEST1-203ENST00000524877 GSAPA4D1B5 854 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 GALTP07902 379 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 CHN1P15882 459 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 TIE1P35590 1138 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 MMRN1Q13201 1228 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 HIPK4Q8NE63 616 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 UBE2E3Q969T4 207 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 PTPN18Q99952 460 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 CDHR5Q9HBB8 845 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 SYBUQ9NX95 663 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 ARL15Q9NXU5 204 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 DNAJC16Q9Y2G8 782 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 BTN3A1O00481 513 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 GUCY1B2O75343 617 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 PRIM2P49643 509 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 PMF1Q6P1K2 205 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 FAM162AQ96A26 154 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 RPS6KB2Q9UBS0 482 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 EVLQ9UI08 416 aaPredicted RBP17.2■□□□□ 0.34
BEST1-203ENST00000524877 SLC24A2Q9UI40 661 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 E7ENQ6 273 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 AGRPO00253 132 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 PATL1Q86TB9 770 aaKnown RBP17.2■□□□□ 0.34
BEST1-203ENST00000524877 TRIM74Q86UV6 250 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 TRIM73Q86UV7 250 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 OR52K1Q8NGK4 314 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 JOSD2Q8TAC2 188 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 NDUFA13Q9P0J0 144 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 MARCOQ9UEW3 520 aaPredicted RBP17.2■□□□□ 0.34
BEST1-203ENST00000524877 SNX5Q9Y5X3 404 aa17.2■□□□□ 0.34
BEST1-203ENST00000524877 TMEM191CA6NGB0 347 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 FPGTO14772 594 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 NDUFB5O43674 189 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 CYP1A1P04798 512 aaPredicted RBP17.19■□□□□ 0.34
BEST1-203ENST00000524877 S100A9P06702 114 aaKnown RBP17.19■□□□□ 0.34
BEST1-203ENST00000524877 PEX5P50542 639 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 RGS9BPQ6ZS82 235 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 KCNK16Q96T55 309 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 BCO2Q9BYV7 579 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 NAV1Q8NEY1 1877 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 MAGEA13PA6NCF6 341 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 USP12O75317 370 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 LCA5LO95447 670 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 TMEM259Q4ZIN3 620 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 FAM45BPQ6NSW5 357 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 HDDC2Q7Z4H3 204 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 FAM45AQ8TCE6 357 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 PGAP2Q9UHJ9 254 aa17.19■□□□□ 0.34
BEST1-203ENST00000524877 ADAMTS5Q9UNA0 930 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms