RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 RASIP1Q5U651 963 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 SLC8B1Q6J4K2 584 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 FSTL4Q6MZW2 842 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 FAM117BQ6P1L5 589 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 C16orf46Q6P387 395 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 KLC3Q6P597 504 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 CDHR3Q6ZTQ4 885 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 SH2D5Q6ZV89 423 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 KDELC2Q7Z4H8 507 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 CMC1Q7Z7K0 106 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 KLHDC8BQ8IXV7 354 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 ARHGAP24Q8N264 748 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 AFAP1L2Q8N4X5 818 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 PAF1Q8N7H5 531 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 GPATCH11Q8N954 259 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 TTC8Q8TAM2 541 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 BCL7CQ8WUZ0 217 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-222ENST00000524006 INPP5DQ92835 1189 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 IGSF8Q969P0 613 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 PSMG2Q969U7 264 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 IMP4Q96G21 291 aaKnown RBP10.89□□□□□ -0.67
SPIDR-222ENST00000524006 KLHL5Q96PQ7 755 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 RANBP9Q96S59 729 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 AGAP2Q99490 1192 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 GPR22Q99680 433 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 SPON2Q9BUD6 331 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 MAGEH1Q9H213 219 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 TASP1Q9H6P5 420 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 TRPC7Q9HCX4 862 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 SAR1AQ9NR31 198 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 NDFIP2Q9NV92 336 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 SPG21Q9NZD8 308 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 HEY2Q9UBP5 337 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 UBA2Q9UBT2 640 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-222ENST00000524006 STK39Q9UEW8 545 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 SEPT3Q9UH03 358 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 CHKBQ9Y259 395 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 REV3LO60673 3130 aa10.89□□□□□ -0.67
SPIDR-222ENST00000524006 FAM95CA0A1B0GW59 222 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 E2F8A0AVK6 867 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 DRGXA6NNA5 263 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 TMEM114B3SHH9 223 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 J3KR12 359 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 TBC1D4O60343 1298 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 PRAMEF11O60813 436 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 CLDN11O75508 207 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 SERPINF2P08697 491 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ZDHHC11BP0C7U3 371 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 KITP10721 976 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 RALBP11234 206 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 FOSL2P15408 326 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 RAG1P15918 1043 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 STMN1P16949 149 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 HLA-DPA1P20036 260 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 CRABP2P29373 138 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 CORO1AP31146 461 aaKnown RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ABCG1P45844 678 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 CLCN5P51795 746 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 MAXP61244 160 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 MXRA7P84157 204 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 GNA12Q03113 381 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 FPGSQ05932 587 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 GRIN2CQ14957 1233 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 SPRED3Q2MJR0 410 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 SNX30Q5VWJ9 437 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 KLHDC10Q6PID8 442 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 KDELC1Q6UW63 502 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 KIAA0408Q6ZU52 694 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 TAS1R1Q7RTX1 841 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 MTDHQ86UE4 582 aaKnown RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 PACS2Q86VP3 889 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 TMEM173Q86WV6 379 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 DENND1CQ8IV53 801 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 CMTR2Q8IYT2 770 aaKnown RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ZNF683Q8IZ20 524 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ELMOD1Q8N336 334 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ZSCAN18Q8TBC5 510 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ISL2Q96A47 359 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 MCUR1Q96AQ8 359 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 FEM1CQ96JP0 617 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 MRGPRX2Q96LB1 330 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 NUDCD1Q96RS6 583 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 YME1L1Q96TA2 773 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 SEMA3CQ99985 751 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 MUC3BQ9H195 1237 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 LRMDAQ9H2I8 198 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 CRISPLD1Q9H336 500 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ATXN3LQ9H3M9 355 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 STN1Q9H668 368 aaKnown RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 NMRAL1Q9HBL8 299 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 ATP13A1Q9HD20 1204 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 COPG2Q9UBF2 871 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 MARCOQ9UEW3 520 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 BAIAP2L1Q9UHR4 511 aa10.88□□□□□ -0.67
SPIDR-222ENST00000524006 LSM7Q9UK45 103 aaKnown RBP10.88□□□□□ -0.67
SPIDR-222ENST00000524006 TBX21Q9UL17 535 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms