RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SLC10A7Q0GE19 358 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
VEGFA-225ENST00000523950 PPP2R5EQ16537 467 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 TFDP3Q5H9I0 405 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 ATXN7L2Q5T6C5 722 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-225ENST00000523950 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 FBXL19Q6PCT2 694 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 MFSD7Q6UXD7 560 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 SPOCD1Q6ZMY3 1216 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 RFX6Q8HWS3 928 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 TP53INP2Q8IXH6 220 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 TEX26Q8N6G2 289 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 LRRC57Q8N9N7 239 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 TSEN2Q8NCE0 465 aaKnown RBP12.72□□□□□ -0.37
VEGFA-225ENST00000523950 OR6K2Q8NGY2 324 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 MAML1Q92585 1016 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-225ENST00000523950 MGME1Q9BQP7 344 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 NUSAP1Q9BXS6 441 aaKnown RBP12.72□□□□□ -0.37
VEGFA-225ENST00000523950 BRD8Q9H0E9 1235 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 ATP13A3Q9H7F0 1226 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 TMEM74BQ9NUR3 256 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 DTLQ9NZJ0 730 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 AMFRQ9UKV5 643 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 SLC6A14Q9UN76 642 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 DMTF1Q9Y222 760 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 EFR3BQ9Y2G0 817 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 FAM186AA6NE01 2351 aa12.72□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3DA0A087WVF3 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3IA0A087WXS9 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3EA0A087X179 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3KA0A087X1G2 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 A0A1W2PPC4 97 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TSPAN11A1L157 253 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 MACROD2A1Z1Q3 448 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3FA6NER0 549 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 MIF4GDA9UHW6 222 aaKnown RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 ESPNB1AK53 854 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3LB9A6J9 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 PPP1R12AO14974 1030 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 MATN3O15232 486 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 LATO43561 262 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 FSBPO95073 299 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 UGT2B4P06133 528 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 SERPINF2P08697 491 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3HP0C7X1 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TGM2P21980 687 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 SERPINA4P29622 427 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 PTPN7P35236 360 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 MMP13P45452 471 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 LIMK1P53667 647 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 RWDD2BP57060 319 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TAS2R38P59533 333 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 CCZ1BP86790 482 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 CCZ1P86791 482 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 PPIDQ08752 370 aaKnown RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 PDK1Q15118 436 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TRIM61Q5EBN2 209 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3GQ6DHY5 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3CQ6IPX1 549 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 KIAA1161Q6NSJ0 714 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 PARS2Q7L3T8 475 aaKnown RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 SRLQ86TD4 932 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 PRPF39Q86UA1 669 aaKnown RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 KIAA2013Q8IYS2 634 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 TBC1D3Q8IZP1 549 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-225ENST00000523950 NETO2Q8NC67 525 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 SNX19Q92543 992 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 VOPP1Q96AW1 172 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 EXOC2Q96KP1 924 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 KLHL32Q96NJ5 620 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 NUDCD1Q96RS6 583 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 ZDHHC5Q9C0B5 715 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 SUV39H2Q9H5I1 410 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 CAPN10Q9HC96 672 aa12.71□□□□□ -0.37
VEGFA-225ENST00000523950 PCDH15Q96QU1 1955 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 PLXNA2O75051 1894 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 PI4KAP42356 2102 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 ATXN2Q99700 1313 aaKnown RBP12.7□□□□□ -0.38
VEGFA-225ENST00000523950 GPR179Q6PRD1 2367 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 hCG_1818297A0A087WSY0 165 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 C16orf96A6NNT2 1141 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 BCAT2O15382 392 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-225ENST00000523950 TSPAN6O43657 245 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 SOCS5O75159 536 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 SYPP08247 313 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 CR2P20023 1033 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 CES1P23141 567 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 GKP32189 559 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 BCL2L1Q07817 233 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 SF3A2Q15428 464 aaKnown RBP12.7□□□□□ -0.38
VEGFA-225ENST00000523950 TEAD4Q15561 434 aa12.7□□□□□ -0.38
VEGFA-225ENST00000523950 CCDC6Q16204 474 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms