RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-250	ENST00000523746	IFNL4	K9M1U5	179 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	HSPB6	O14558	160 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	ADAM10	O14672	748 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	MDM4	O15151	490 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	DOK2	O60496	412 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	PAGE4	O60829	102 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	IFNA2	P01563	188 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	LDHC	P07864	332 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	FGF2	P09038	288 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	HOXB5	P09067	269 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	SLC2A4	P14672	509 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	KEL	P23276	732 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	POU1F1	P28069	291 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	MLH1	P40692	756 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	CTCF	P49711	727 aa	Predicted RBP	4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	DRG2	P55039	364 aa	Known RBP	4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	OLR1	P78380	273 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	TMEM115	Q12893	351 aa	Predicted RBP	4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	TRIP6	Q15654	476 aa	Known RBP	4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	GSTA3	Q16772	222 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	MORN5	Q5VZ52	161 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	NCAPH2	Q6IBW4	605 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	TMEM71	Q6P5X7	295 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	SYCE2	Q6PIF2	218 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	SLC2A7	Q6PXP3	512 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	GPAT4	Q86UL3	456 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	CNGA4	Q8IV77	575 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	CCDC105	Q8IYK2	499 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	LRRC57	Q8N9N7	239 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	ATOH1	Q92858	354 aa	Predicted RBP	4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	SNAPC3	Q92966	411 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	INTS12	Q96CB8	462 aa	Known RBP	4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	ZNF333	Q96JL9	665 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	MAP7D2	Q96T17	732 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	SLITRK6	Q9H5Y7	841 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	MVB12B	Q9H7P6	319 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	C11orf21	Q9P2W6	132 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746	BTBD3	Q9Y2F9	522 aa		4.95	□□□□□ -1.62
PTK2-250	ENST00000523746		A0A0U1RQF3	1178 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746		A0A1W2PPC1	479 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	NPIPB11	E5RHQ5	1161 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	SEC31A	O94979	1220 aa	Known RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	CLDN7	O95471	211 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	MMP3	P08254	477 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	SRD5A1	P18405	259 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	CDH2	P19022	906 aa	Predicted RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	CD38	P28907	300 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	DCTD	P32321	178 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	CXCR3	P49682	368 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	RARS	P54136	660 aa	Known RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	NAP1L1	P55209	391 aa	Known RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	HDAC4	P56524	1084 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	NANOS3	P60323	173 aa	Known RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	MAMLD1	Q13495	774 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	INPP5J	Q15735	1006 aa	Predicted RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	CCNG2	Q16589	344 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	NCEH1	Q6PIU2	408 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	C16orf52	Q8NHV5	167 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	MPLKIP	Q8TAP9	179 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	USP6NL	Q92738	828 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	H2AFJ	Q9BTM1	129 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	TASP1	Q9H6P5	420 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	ABI3	Q9P2A4	366 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	PTGFRN	Q9P2B2	879 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	RAP2C	Q9Y3L5	183 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	LAS1L	Q9Y4W2	734 aa	Known RBP	4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	KCNE2	Q9Y6J6	123 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746	ZNF804B	A4D1E1	1349 aa		4.94	□□□□□ -1.62
PTK2-250	ENST00000523746		A0A1W2PRG0	241 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	LIPT2	A6NK58	231 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	HSPB2	A8KAH6	182 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	SLC25A17	O43808	307 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	KLK8	O60259	260 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	TF	P02787	698 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	KLKB1	P03952	638 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	CHRNB1	P11230	501 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	CDA	P32320	146 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	HOXD13	P35453	343 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	ARL3	P36405	182 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	PBX3	P40426	434 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	CLNS1A	P54105	237 aa	Known RBP	4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	ARF3	P61204	181 aa	Predicted RBP	4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	ARF1	P84077	181 aa	Known RBP	4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	SRSF4	Q08170	494 aa	Known RBP	4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	FAM27E3	Q08E93	113 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	HSPB2	Q16082	182 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	ALG11	Q2TAA5	492 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	COLEC12	Q5KU26	742 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	ZNF626	Q68DY1	528 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	ITPRIPL1	Q6GPH6	555 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	HMBOX1	Q6NT76	420 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	TBC1D26	Q86UD7	250 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.93	□□□□□ -1.62	2e-6	■■□□□ 13.2
PTK2-250	ENST00000523746	RBFA	Q8N0V3	343 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	TEX45	Q8NA69	505 aa		4.93	□□□□□ -1.62
PTK2-250	ENST00000523746	TMEM116	Q8NCL8	245 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms