RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MAP6D1Q9H9H5 199 aa6.35□□□□□ -1.39
CPNE3-206ENST00000523469 FBXO40Q9UH90 709 aa6.35□□□□□ -1.39
CPNE3-206ENST00000523469 TMEM131LA2VDJ0 1609 aa6.35□□□□□ -1.39
CPNE3-206ENST00000523469 DLC1Q96QB1 1528 aa6.35□□□□□ -1.39
CPNE3-206ENST00000523469 PTPRUQ92729 1446 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 PARD3Q8TEW0 1356 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 SHANK3Q9BYB0 1731 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 RRN3P2A6NIE6 340 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 KLKB1P03952 638 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 PSG1P11464 419 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 TNFRSF1BP20333 461 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 TBXAS1P24557 533 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-206ENST00000523469 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.34□□□□□ -1.39
CPNE3-206ENST00000523469 COLCA1Q6ZS62 124 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 IRF2BP2Q7Z5L9 587 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 WDR5BQ86VZ2 330 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 GPSM1Q86YR5 675 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 SETD9Q8NE22 299 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 SLC25A28Q96A46 364 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 CD180Q99467 661 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 TMEM160Q9NX00 188 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 GRHL1Q9NZI5 618 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 HDAC6Q9UBN7 1215 aa6.34□□□□□ -1.39
CPNE3-206ENST00000523469 CASZ1Q86V15 1759 aa6.34□□□□□ -1.4
CPNE3-206ENST00000523469 SH2D7A6NKC9 451 aaPredicted RBP6.33□□□□□ -1.4
CPNE3-206ENST00000523469 RNMTO43148 476 aaKnown RBP6.33□□□□□ -1.4
CPNE3-206ENST00000523469 CREB3O43889 395 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 KIF1CO43896 1103 aaKnown RBP6.33□□□□□ -1.4
CPNE3-206ENST00000523469 SYF2O95926 243 aaKnown RBP6.33□□□□□ -1.4
CPNE3-206ENST00000523469 UNGP13051 313 aaPredicted RBP6.33□□□□□ -1.4
CPNE3-206ENST00000523469 CNTFP26441 200 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 CLCNKBP51801 687 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 PRELPP51888 382 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 VAMP2P63027 116 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 KDM1BQ8NB78 822 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 LPAR1Q92633 364 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 TBC1D14Q9P2M4 693 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
CPNE3-206ENST00000523469 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 FAM90A7PA6NKC0 464 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 FAM90A22PA8MWA6 464 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 FAM90A12PA8MX19 464 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 FAM90A23PA8MXZ1 464 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 NPHP1O15259 732 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 CBX6O95503 412 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 POLBP06746 335 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 TNFSF8P32971 234 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 TRPC3Q13507 836 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 PKP1Q13835 747 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 PTGR1Q14914 329 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 PRTGQ2VWP7 1150 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 SYTL3Q4VX76 610 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 TBC1D9BQ66K14 1250 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 NUGGCQ68CJ6 796 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 CAMK1DQ8IU85 385 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 FAM217AQ8IXS0 508 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 ZDHHC23Q8IYP9 409 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 LRRC57Q8N9N7 239 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 ZNF333Q96JL9 665 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 B3GNT4Q9C0J1 378 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 ALKBH4Q9NXW9 302 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 CDH22Q9UJ99 828 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 GJD2Q9UKL4 321 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 RAP2CQ9Y3L5 183 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 CLDN16Q9Y5I7 305 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 NRAPQ86VF7 1730 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 ABCA3Q99758 1704 aa6.32□□□□□ -1.4
CPNE3-206ENST00000523469 NPHP3Q7Z494 1330 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 CROCC2H7BZ55 1655 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 ADGRL2O95490 1459 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 TARSL2A2RTX5 802 aaKnown RBP6.31□□□□□ -1.4
CPNE3-206ENST00000523469 C17orf102A2RUQ5 167 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 H3BNX3 289 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 BMP15O95972 392 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 CHRM4P08173 479 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 LMO1P25800 156 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 PSMC2P35998 433 aaKnown RBP6.31□□□□□ -1.4
CPNE3-206ENST00000523469 PTPN9P43378 593 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 POLD2P49005 469 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 RPE65Q16518 533 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 SLC18A3Q16572 532 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 LEXMQ3ZCV2 418 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 HSP90AB4PQ58FF6 505 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 Q5PR19 223 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 NAPEPLDQ6IQ20 393 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 RETSATQ6NUM9 610 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 PARM1Q6UWI2 310 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 GHDCQ8N2G8 530 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 TMEM199Q8N511 208 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 LSM14AQ8ND56 463 aaKnown RBP6.31□□□□□ -1.4
CPNE3-206ENST00000523469 GPR63Q9BZJ6 419 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 MROH8Q9H579 483 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 GGA3Q9NZ52 723 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 GTF2A1LQ9UNN4 478 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 SQORQ9Y6N5 450 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 CEP162Q5TB80 1403 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 ERBINQ96RT1 1412 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 UTRNP46939 3433 aa6.31□□□□□ -1.4
CPNE3-206ENST00000523469 LMTK2Q8IWU2 1503 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 PXDNQ92626 1479 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms