RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 SORCS1Q8WY21 1168 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 PRCCQ92733 491 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-211ENST00000522802 SAAL1Q96ER3 474 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 SIPA1Q96FS4 1042 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 SLITRK1Q96PX8 696 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 NUP58Q9BVL2 599 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 TM6SF1Q9BZW5 370 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 MTMR12Q9C0I1 747 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 PCED1AQ9H1Q7 454 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 DPEP3Q9H4B8 488 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 GDAP2Q9NXN4 497 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 PLK2Q9NYY3 685 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 LARSQ9P2J5 1176 aaKnown RBP6.64□□□□□ -1.35
VPS13B-211ENST00000522802 AGO2Q9UKV8 859 aaKnown RBP6.64□□□□□ -1.35
VPS13B-211ENST00000522802 CLCA2Q9UQC9 943 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 LRBAP50851 2863 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 H0YCG3 227 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 KLK10O43240 276 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 BUB1BO60566 1050 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 REC8O95072 547 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 FSBPO95073 299 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 SEMA4FO95754 770 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 WNT1P04628 370 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 IGHV4-34P06331 123 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 KRT19P08727 400 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 PDGFRBP09619 1106 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 PLA2G4BP0C869 781 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ACADMP11310 421 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ABCB4P21439 1286 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 EPHA8P29322 1005 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 OXTRP30559 389 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 DDIT3P35638 169 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 LHX1P48742 406 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 TOB1P50616 345 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ZNF131P52739 623 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 MFAP3P55082 362 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 JAM2P57087 298 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ZNF234Q14588 700 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ZNF460Q14592 562 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 HECTD3Q5T447 861 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ETV3LQ6ZN32 361 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 LIMS2Q7Z4I7 341 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 DHX40Q8IX18 779 aaKnown RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 RBM12BQ8IXT5 1001 aaKnown RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 MYCT1Q8N699 235 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 CSGALNACT2Q8N6G5 542 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 SCAMP5Q8TAC9 235 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 SAP25Q8TEE9 199 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 KCNE4Q8WWG9 221 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 RFFLQ8WZ73 363 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 FBXO32Q969P5 355 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 C8orf48Q96LL4 319 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 CEP295NLQ96MC4 621 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 XPO6Q96QU8 1125 aaKnown RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ELF4Q99607 663 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 FAM213AQ9BRX8 229 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 SMURF1Q9HCE7 757 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 HSPBP1Q9NZL4 362 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 EHD2Q9NZN4 543 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 THAP10Q9P2Z0 257 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 ITGA11Q9UKX5 1188 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 CDH9Q9ULB4 789 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 HEMK1Q9Y5R4 338 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-211ENST00000522802 STYXL1Q9Y6J8 313 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 FBN2P35556 2912 aa6.63□□□□□ -1.35
VPS13B-211ENST00000522802 VILLO15195 856 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 OPA1O60313 960 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 SYNCRIPO60506 623 aaKnown RBP6.62□□□□□ -1.35
VPS13B-211ENST00000522802 TSPAN3O60637 253 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 IL18RAPO95256 599 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 TBX18O95935 607 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 C1SP09871 688 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 GP1BBP13224 206 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 MYF5P13349 255 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 POU3F2P20265 443 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-211ENST00000522802 ACO1P21399 889 aaKnown RBP6.62□□□□□ -1.35
VPS13B-211ENST00000522802 WARSP23381 471 aaKnown RBP6.62□□□□□ -1.35
VPS13B-211ENST00000522802 CD27P26842 260 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 YWHAQP27348 245 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 TUBP50607 506 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 SLC5A3P53794 718 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 CDH8P55286 799 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 C21orf59P57076 290 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 GTF2BQ00403 316 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 MAPRE1Q15691 268 aaKnown RBP6.62□□□□□ -1.35
VPS13B-211ENST00000522802 ZNF124Q15973 351 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 CR1LQ2VPA4 569 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 TMEM119Q4V9L6 283 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 TM4SF20Q53R12 229 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 HYIQ5T013 277 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 SFMBT2Q5VUG0 894 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 KANSL1Q7Z3B3 1105 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 B3GNT8Q7Z7M8 397 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 GPBP1Q86WP2 473 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 BRSK2Q8IWQ3 736 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 ZNF366Q8N895 744 aa6.62□□□□□ -1.35
VPS13B-211ENST00000522802 EXD3Q8N9H8 876 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms