RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ZDBF2Q9HCK1 2354 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 EPHX1P07099 455 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 NNMTP40261 264 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 RPL21P46778 160 aaKnown RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 PLK1P53350 603 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 ST8SIA6P61647 398 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 DENND2CQ68D51 928 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 Q6ZS52 159 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 RALGPS2Q86X27 583 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 PAF1Q8N7H5 531 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 FRMD8P1Q9BZ68 369 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 NOD2Q9HC29 1040 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 ARHGEF3Q9NR81 526 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 NEU2Q9Y3R4 380 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 E7EVH7 732 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 PIGNO95427 931 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 NR1D1P20393 614 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 PRKCHP24723 683 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 LSP1P33241 339 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 GRIA1P42261 906 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 PLTPP55058 493 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 LMNB2Q03252 620 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 NIPAL4Q0D2K0 466 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 DHX34Q14147 1143 aaKnown RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 MLF2Q15773 248 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 LRRC73Q5JTD7 316 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 KIAA0907Q7Z7F0 614 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-219ENST00000522387 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 CHST14Q8NCH0 376 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 MAML1Q92585 1016 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 DNASE1L2Q92874 299 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 TTC17Q96AE7 1141 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 BRD8Q9H0E9 1235 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 CENPHQ9H3R5 247 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 RETREG1Q9H6L5 497 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 ZDHHC6Q9H6R6 413 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
PABPC1-219ENST00000522387 A0A0U1RQS6 177 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 C5orf60A6NFR6 353 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 GOLGA8CPA6NN73 597 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 IFI35P80217 286 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 SEMG2Q02383 582 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 PTPRRQ15256 657 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 UAP1Q16222 522 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 TMEM196Q5HYL7 178 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 HP1BP3Q5SSJ5 553 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 UBAP2Q5T6F2 1119 aaKnown RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 ANKRD22Q5VYY1 191 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 PKN3Q6P5Z2 889 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 DPY19L3Q6ZPD9 716 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 ZNF557Q8N988 423 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 TXNDC5Q8NBS9 432 aaKnown RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 IPMKQ8NFU5 416 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 RPLP0P6Q8NHW5 317 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 OXNAD1Q96HP4 312 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 ATP6V1G3Q96LB4 118 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 SMIM14Q96QK8 99 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 GORASP1Q9BQQ3 440 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 POLR1EQ9GZS1 481 aaKnown RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 EPN3Q9H201 632 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 PLAAQ9Y263 795 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 KIAA1549LQ6ZVL6 1849 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 AVILO75366 819 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 GCATO75600 419 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 PDGFBP01127 241 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 HSD17B3P37058 310 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 SULT2A1Q06520 285 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 C22orf39Q6P5X5 142 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 UBLCP1Q8WVY7 318 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 PSKH2Q96QS6 385 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 SLC6A17Q9H1V8 727 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 C8orf33Q9H7E9 229 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-219ENST00000522387 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 PCDH9Q9HC56 1237 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 TRPV5Q9NQA5 729 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
PABPC1-219ENST00000522387 ATXN2Q99700 1313 aaKnown RBP12.52□□□□□ -0.4
PABPC1-219ENST00000522387 A8MX80 341 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 HMGB1P1B2RPK0 211 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-219ENST00000522387 MTSS1O43312 755 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 OPHN1O60890 802 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 KIAA0754O94854 1291 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 TARSP26639 723 aaKnown RBP12.52□□□□□ -0.41
PABPC1-219ENST00000522387 EIF2DP41214 584 aaKnown RBP12.52□□□□□ -0.41
PABPC1-219ENST00000522387 KIR2DL1P43626 348 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-219ENST00000522387 METAP1P53582 386 aa12.52□□□□□ -0.41
PABPC1-219ENST00000522387 INO80DQ53TQ3 878 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms