RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CCDC184Q52MB2 194 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZNF766Q5HY98 468 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 HEPHL1Q6MZM0 1159 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 C17orf99Q6UX52 265 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 TRIM74Q86UV6 250 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 TRIM73Q86UV7 250 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 GPSM1Q86YR5 675 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 LRRC57Q8N9N7 239 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 TMEM163Q8TC26 289 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 RUFY2Q8WXA3 655 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 SEC62Q99442 399 aaKnown RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 WDR77Q9BQA1 342 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 CHMP4AQ9BY43 222 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 KLHL31Q9H511 634 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 UBN1Q9NPG3 1134 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 RRP7BPQ9NSQ0 103 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 SIRT3Q9NTG7 399 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC25A10Q9UBX3 287 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZNF69Q9UC07 566 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 CYP46A1Q9Y6A2 500 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 HECW1Q76N89 1606 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 NCOA1Q15788 1441 aa3.5□□□□□ -1.85
HMGB1P41-201ENST00000520234 WDR62O43379 1518 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ADGRL2O95490 1459 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 FSD2A1L4K1 749 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 MYMKA6NI61 221 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 STMND1H3BQB6 276 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 SPTLC2O15270 562 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 CEP104O60308 925 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 AGR2O95994 175 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 CHRNB2P17787 502 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 TNFRSF1BP20333 461 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 RFC1P35251 1148 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 AVPR1AP37288 418 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ARSFP54793 590 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ME3Q16798 604 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 EDRF1Q3B7T1 1238 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 FBXO43Q4G163 708 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 WASHC2DQ5SRD0 308 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 JAKMIP3Q5VZ66 844 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 NUGGCQ68CJ6 796 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 CRELD2Q6UXH1 353 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 FAM83HQ6ZRV2 1179 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC16A12Q6ZSM3 486 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 IRF2BP2Q7Z5L9 587 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 MON1AQ86VX9 555 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 TMEM199Q8N511 208 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 HORMAD2Q8N7B1 307 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 C11orf65Q8NCR3 313 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 OR4N2Q8NGD1 307 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 GABPB2Q8TAK5 448 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ST8SIA4Q92187 359 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ELP4Q96EB1 424 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 RNF125Q96EQ8 232 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 APOPT1Q96IL0 206 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZNF48Q96MX3 618 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 NAP1L4Q99733 375 aaKnown RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 EIF2AK1Q9BQI3 630 aaKnown RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ISCUQ9H1K1 167 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 UNC45AQ9H3U1 944 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 CXorf56Q9H5V9 222 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 CATSPERBQ9H7T0 1116 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 PRKRIP1Q9H875 184 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 IL1RAPL1Q9NZN1 696 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 PLEKHB1Q9UF11 243 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 DAPK1P53355 1430 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 TROQ12816 1431 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 ADAMTS12P58397 1594 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 CCDC7Q96M83 1385 aa3.49□□□□□ -1.85
HMGB1P41-201ENST00000520234 NUP153P49790 1475 aaKnown RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 LRRIQ1Q96JM4 1722 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 UHRF1BP1Q6BDS2 1440 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 CNTLNQ9NXG0 1405 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 DDTLA6NHG4 134 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 A6NLC8 198 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 B4DGG1 531 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 H3BNX3 289 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 EBAG9O00559 213 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 TCERG1O14776 1098 aaKnown RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 TNPO2O14787 897 aaKnown RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 BMP15O95972 392 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 PTPN2P17706 415 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 PAFAH1B1P43034 410 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 ENTPD1P49961 510 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 TUBP50607 506 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 CDH12P55289 794 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 SELENOVP59797 346 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZP1P60852 638 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 YWHAZP63104 245 aaKnown RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 CYP4A11Q02928 519 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC18A2Q05940 514 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 GALNT2Q10471 571 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 DUSP6Q16828 381 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 LEXMQ3ZCV2 418 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 ATG9BQ674R7 924 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 TMEM71Q6P5X7 295 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC22A25Q6T423 547 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 RRM2BQ7LG56 351 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 CHD1LQ86WJ1 897 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 RBFAQ8N0V3 343 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms