RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SESN1Q9Y6P5 492 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 FNDC1Q4ZHG4 1894 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 A0A087X1B8 175 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 C17orf102A2RUQ5 167 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 DPPA5A6NC42 116 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 PROP1O75360 226 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 ERAL1O75616 437 aaKnown RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 CSPG5O95196 566 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 MT-CYBP00156 380 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 WNT1P04628 370 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 PRR35P0CG20 571 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 NHLRC4P0CG21 123 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 PCNAP12004 261 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 MCM3P25205 808 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 RYKP34925 604 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 EIF2DP41214 584 aaKnown RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 DPP6P42658 865 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 GPR12P47775 334 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 CEBPZQ03701 1054 aaKnown RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 FRG1Q14331 258 aaKnown RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 SHBQ15464 509 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 EARS2Q5JPH6 523 aaKnown RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 TTC39AQ5SRH9 613 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 FCRLBQ6BAA4 426 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 NCAPH2Q6IBW4 605 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 TSSK4Q6SA08 328 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 TBC1D26Q86UD7 250 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 ZDHHC23Q8IYP9 409 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 FAM185AQ8N0U4 392 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 PIMREGQ9BSJ6 248 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 TEX12Q9BXU0 123 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 IKZF4Q9H2S9 585 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 RRP7BPQ9NSQ0 103 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 RNF146Q9NTX7 359 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 SUCLA2Q9P2R7 463 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 CHORDC1Q9UHD1 332 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 MYRFQ9Y2G1 1151 aa5.57□□□□□ -1.52
HMGB1P46-201ENST00000520062 AOX1Q06278 1338 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 A0A096LPK6 155 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 TRBV5-7A0A0A0MS05 114 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 A0A1W2PQ09 198 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 C2CD4BA6NLJ0 364 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 FOXO6A8MYZ6 492 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 NPIPB11E5RHQ5 1161 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 DKC1O60832 514 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 HOXA13P31271 388 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 SLC16A2P36021 539 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 PMPCAQ10713 525 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 PKP1Q13835 747 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 FGFBP1Q14512 234 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 IRF3Q14653 427 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 PPP2R5BQ15173 497 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 ALG10Q5BKT4 473 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 ALG10BQ5I7T1 473 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 ZNF362Q5T0B9 420 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 GPR139Q6DWJ6 353 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 JADE1Q6IE81 842 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 NAA16Q6N069 864 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 HMBOX1Q6NT76 420 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 TRIM74Q86UV6 250 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 TRIM73Q86UV7 250 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 CADM3Q8N126 398 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 C8orf58Q8NAV2 365 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 YME1L1Q96TA2 773 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 NCAPGQ9BPX3 1015 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 AP1M1Q9BXS5 423 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 PAPOLBQ9NRJ5 636 aaKnown RBP5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 SLC6A13Q9NSD5 602 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 CFDP1Q9UEE9 299 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 FAM96BQ9Y3D0 163 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 INSL6Q9Y581 213 aa5.56□□□□□ -1.52
HMGB1P46-201ENST00000520062 KAT6BQ8WYB5 2073 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 A0A1W2PRQ8 180 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 HCRTR2O43614 444 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 NDUFS3O75489 264 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 UNGP13051 313 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 CTPS1P17812 591 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 BMP5P22003 454 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 PROZP22891 400 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 GCH1P30793 250 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 CLDN2P57739 230 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 ALG11Q2TAA5 492 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 MEX3CQ5U5Q3 659 aaKnown RBP5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 GKAP1Q5VSY0 366 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 OLFML1Q6UWY5 402 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 GLDNQ6ZMI3 551 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 FAM57BQ71RH2 274 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 ADGRA1Q86SQ6 560 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 DDIASQ8IXT1 998 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 KIAA2013Q8IYS2 634 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 DPP10Q8N608 796 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 CCDC191Q8NCU4 936 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 BBS4Q96RK4 519 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 PLK2Q9NYY3 685 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 LAMP3Q9UQV4 416 aa5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 AAR2Q9Y312 384 aaKnown RBP5.55□□□□□ -1.52
HMGB1P46-201ENST00000520062 F8W810 466 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 RHODO00212 210 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 MATN3O15232 486 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms