RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 CDKN1AP38936 164 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 ZNF132P52740 706 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 PNLIPRP1P54315 467 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 PMP22Q01453 160 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 PICALMQ13492 652 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 DHX34Q14147 1143 aaKnown RBP2.78□□□□□ -1.96
PCM1-208ENST00000518877 HSP90AB2PQ58FF8 381 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 SYCP2LQ5T4T6 812 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 TTC22Q5TAA0 569 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 GGT6Q6P531 493 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 OR4N2Q8NGD1 307 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 RFWD2Q8NHY2 731 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 SCAMP5Q8TAC9 235 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 TMEM41AQ96HV5 264 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 MYD88Q99836 296 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 RTKNQ9BST9 563 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 MVB12BQ9H7P6 319 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 ACAD9Q9H845 621 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 OBP2BQ9NPH6 170 aa2.78□□□□□ -1.96
PCM1-208ENST00000518877 DDX43Q9NXZ2 648 aaKnown RBP2.78□□□□□ -1.96
PCM1-208ENST00000518877 GOLGA6L3A6NEY3 463 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 FAM157AC9JC47 383 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 TIMM23O14925 209 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 SYN3O14994 580 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 HNRNPRO43390 633 aaKnown RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 EXTL3O43909 919 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 CETPP11597 493 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 CYP4B1P13584 511 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 SSTR2P30874 369 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 CLCN3P51790 818 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 RPS6KA3P51812 740 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 HLTFQ14527 1009 aaKnown RBP eCLIP2.77□□□□□ -1.972e-6■■□□□ 13.8
PCM1-208ENST00000518877 CALCRLQ16602 461 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 LRRC24Q50LG9 513 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 FAM69BQ5VUD6 431 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 NCAPH2Q6IBW4 605 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 RASGRP2Q7LDG7 609 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 KRTAP7-1Q8IUC3 87 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 EPHX4Q8IUS5 362 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 SLC44A2Q8IWA5 706 aaPredicted RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 BRSK2Q8IWQ3 736 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 PTGR2Q8N8N7 351 aaPredicted RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 SVIPQ8NHG7 77 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 KATNAL1Q9BW62 490 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 MOV10L1Q9BXT6 1211 aaKnown RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 BRD8Q9H0E9 1235 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 ZNF696Q9H7X3 374 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 ZNF334Q9HCZ1 680 aaPredicted RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 TMEM51Q9NW97 253 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 GEMIN8Q9NWZ8 242 aaKnown RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 GRHL1Q9NZI5 618 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 LRFN1Q9P244 771 aa2.77□□□□□ -1.97
PCM1-208ENST00000518877 C19orf53Q9UNZ5 99 aaPredicted RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 MORC2Q9Y6X9 1032 aaPredicted RBP2.77□□□□□ -1.97
PCM1-208ENST00000518877 A0A087WV62 115 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 FAM90A20PA6NIJ5 464 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 KIF1CO43896 1103 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 ACTL6BO94805 426 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 BAG4O95429 457 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 VNN2O95498 520 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 PMS2P2O95744 297 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 IGHV4-30-4P0DP06 118 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 ACP5P13686 325 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 SKIV2L2P42285 1042 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 BRWD1-AS2P59051 145 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 LPIN1Q14693 890 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 RAB11FIP2Q7L804 512 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 SH2D6Q7Z4S9 175 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 FAM186BQ8IYM0 893 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 AADATQ8N5Z0 425 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 MCPH1Q8NEM0 835 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 ATOH1Q92858 354 aaPredicted RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 ELAC2Q9BQ52 826 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 DDX23Q9BUQ8 820 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 BARHL1Q9BZE3 327 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 CLPBQ9H078 707 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 PABPC3Q9H361 631 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 CXorf56Q9H5V9 222 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 ELAC1Q9H777 363 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 WDR6Q9NNW5 1121 aaKnown RBP2.76□□□□□ -1.97
PCM1-208ENST00000518877 PRDM8Q9NQV8 689 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 ZFP57Q9NU63 452 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 NLKQ9UBE8 527 aa2.76□□□□□ -1.97
PCM1-208ENST00000518877 A0A096LPK6 155 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 CCNT1O60563 726 aaKnown RBP2.75□□□□□ -1.97
PCM1-208ENST00000518877 TFRCP02786 760 aaKnown RBP2.75□□□□□ -1.97
PCM1-208ENST00000518877 ITGA2BP08514 1039 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 YWHAQP27348 245 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 SERPINA4P29622 427 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 TECP42680 631 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 GPR12P47775 334 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 MTNR1AP48039 350 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 HSD17B4P51659 736 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 MVDP53602 400 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 FAM27E3Q08E93 113 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 STARD3Q14849 445 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 RPS6KA2Q15349 733 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 TUBB8Q3ZCM7 444 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 DGAT2L7PQ6IED9 249 aa2.75□□□□□ -1.97
PCM1-208ENST00000518877 CCSAPQ6IQ19 270 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms