RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 ASB12Q8WXK4 309 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 HMCESQ96FZ2 354 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 LENG8Q96PV6 779 aaPredicted RBP17.74■□□□□ 0.43
DDX41-217ENST00000515562 C1QTNF2Q9BXJ5 285 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 TTYH3Q9C0H2 523 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 AIPL1Q9NZN9 384 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 AP4E1Q9UPM8 1137 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 FAM208BQ5VWN6 2430 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 A0A1B0GTH6 734 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 TMCO5BA8MYB1 307 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 FPGTO14772 594 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 PIAS2O75928 621 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 PAK4O96013 591 aaPredicted RBP17.73■□□□□ 0.43
DDX41-217ENST00000515562 ACP1P24666 158 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 PROX2Q3B8N5 592 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 PARGQ86W56 976 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 SLC25A45Q8N413 288 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 NXPE2Q96DL1 559 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 KLHL32Q96NJ5 620 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 HAUS4Q9H6D7 363 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 MFHAS1Q9Y4C4 1052 aa17.73■□□□□ 0.43
DDX41-217ENST00000515562 POM121BA6NF01 834 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 TRABD2BA6NFA1 517 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 NEMP2A6NFY4 417 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 IGLON5A6NGN9 336 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 TRIM38O00635 465 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 AREL1O15033 823 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 ATMINO43313 823 aaPredicted RBP17.72■□□□□ 0.43
DDX41-217ENST00000515562 SIGLEC6O43699 453 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 RNF8O76064 485 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 ALPPL2P10696 532 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 GZMAP12544 262 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 JUPP14923 745 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 PRKCIP41743 596 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 NDST2P52849 883 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 HNRNPKP61978 463 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDX41-217ENST00000515562 GRM3Q14832 879 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 HES3Q5TGS1 186 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 MARCH9Q86YJ5 346 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 FNIP1Q8TF40 1166 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 VOPP1Q96AW1 172 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 TRIM11Q96F44 468 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 BMFQ96LC9 184 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 C1QTNF7Q9BXJ2 289 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 EDEM3Q9BZQ6 932 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 KLC2Q9H0B6 622 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 LRRC19Q9H756 370 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 DNAJC28Q9NX36 388 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 NLGN3Q9NZ94 848 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 DKK3Q9UBP4 350 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 UBA2Q9UBT2 640 aaPredicted RBP17.72■□□□□ 0.43
DDX41-217ENST00000515562 ITM2BQ9Y287 266 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 SCINQ9Y6U3 715 aa17.72■□□□□ 0.43
DDX41-217ENST00000515562 ANKRD11Q6UB99 2663 aaPredicted RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 SPTY2D1-AS1A0A0U1RR47 76 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 H3BM21 787 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 EEF2KO00418 725 aaKnown RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 RAD51BO15315 384 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 FFAR2O15552 330 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 SPINT1O43278 529 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 SERPINC1P01008 464 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 SUOXP51687 545 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 DAB2P98082 770 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 KLHL30Q0D2K2 578 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 ZNF571Q7Z3V5 609 aaPredicted RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 TTC7BQ86TV6 843 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 DNAAF5Q86Y56 855 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 PSTKQ8IV42 348 aaKnown RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 KLF6Q99612 283 aaPredicted RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 NCAPGQ9BPX3 1015 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 CPEB1Q9BZB8 566 aaKnown RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 DHX35Q9H5Z1 703 aaKnown RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 PDFQ9HBH1 243 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 EVA1BQ9NVM1 165 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 UCKL1Q9NWZ5 548 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 LHX3Q9UBR4 397 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 GGT7Q9UJ14 662 aa17.71■□□□□ 0.43
DDX41-217ENST00000515562 ARID1BQ8NFD5 2236 aaPredicted RBP17.71■□□□□ 0.43
DDX41-217ENST00000515562 GOLGA4Q13439 2230 aaKnown RBP17.7■□□□□ 0.42
DDX41-217ENST00000515562 TMEM191CA6NGB0 347 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 PRPSAP2O60256 369 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 FTLP02792 175 aaPredicted RBP17.7■□□□□ 0.42
DDX41-217ENST00000515562 CSF2P04141 144 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 MYBL1P10243 752 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 NME1P15531 152 aaKnown RBP17.7■□□□□ 0.42
DDX41-217ENST00000515562 ZNF135P52742 658 aaPredicted RBP17.7■□□□□ 0.42
DDX41-217ENST00000515562 TPM4P67936 248 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 CYP4F3Q08477 520 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 PDE1CQ14123 709 aaPredicted RBP17.7■□□□□ 0.42
DDX41-217ENST00000515562 FZD2Q14332 565 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 FIGNQ5HY92 759 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 ERMARDQ5T6L9 678 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 E4F1Q66K89 784 aaPredicted RBP17.7■□□□□ 0.42
DDX41-217ENST00000515562 CXorf40AQ8TE69 158 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 RFFLQ8WZ73 363 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 ZNF653Q96CK0 615 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 SNRNP25Q9BV90 132 aaKnown RBP17.7■□□□□ 0.42
DDX41-217ENST00000515562 DUSP23Q9BVJ7 150 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
DDX41-217ENST00000515562 CNOT8Q9UFF9 292 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms